Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0929 |
Symbol | |
ID | 6316831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 987097 |
End bp | 987837 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642643302 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001917102 |
Protein GI | 188585557 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00000396402 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATAAAA TACATCCCGG TTTCAAAATG AAATCTTTGG CACAATTATT ATTTTGCTTA CTTATTTTCA GCACCTTATA TATTATTTTA TTTTTTAATT CCATTGACCT GACTTGGTTC CAAGACAATT TACATATCCT ACGTTCTTAC GCAGATAATA ACTTGTTTTT AACAATATTA ATCTTTTTTA TAATCCGCTT TTTCTTTGCT GTCGTATCAA TTCCCGGTAG TGGTGTCTTA ACTATTGTTG CTGGTGCTAT TTTTGGCTTT TTATTGGCTT CGATTTTAGT TACCATATCT GTTAGTCTTG GGGTATTTGT GGTGTTTTTA ATAAGTAGAT ATGCACTCCG TGACTACCTT ACAAGAAAAT TCTCAGATAA ACTTGAGTAT GTTGAGCAAG TCTCGCGAGA CCATGGAGCA AGTTTGCTGT TTTTATCTAG AGTTACTGAG ATCATTCCTT CTTTTGCCAT AAATTCTTTG TTTGCTTTAA CTCCTATCAA GGCAAGTACG TATTACTGGA TAAGCCTTGT GGGCCTGTTA CCAGGTATTT TGATCTATGT TAATGCTGGA CATCAAATCA CTGAAATTCA AAAACTATCT GATCTTATAT CCCCCAAGAT CACAATATCT CTAGCGGCAT TAGGATTCAT TCCACTAATC ACCAGTGTTT TTTATAAGTA TATTTGTAGA AGACTTTTAA GGGGTAGTGA TTATGACCAG TTATCTAAGC AAACAAAATA G
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Protein sequence | MDKIHPGFKM KSLAQLLFCL LIFSTLYIIL FFNSIDLTWF QDNLHILRSY ADNNLFLTIL IFFIIRFFFA VVSIPGSGVL TIVAGAIFGF LLASILVTIS VSLGVFVVFL ISRYALRDYL TRKFSDKLEY VEQVSRDHGA SLLFLSRVTE IIPSFAINSL FALTPIKAST YYWISLVGLL PGILIYVNAG HQITEIQKLS DLISPKITIS LAALGFIPLI TSVFYKYICR RLLRGSDYDQ LSKQTK
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