Gene Nther_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0907 
Symbol 
ID6314959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp959572 
End bp960354 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content38% 
IMG OID642643280 
ProductABC transporter related 
Protein accessionYP_001917080 
Protein GI188585535 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000299465 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAGA AACAGCTTGA CCAAGAAGCA AACAGCGAAA ACAACAAAAT AATACAAGTT 
AATCAACTGG TAAAACAATA TGAAGGAGGA GTTACAGCCG TAGACAATAT TTCTTTTCAG
GTGGATGAAG GCGAGATTTT TGCTTTTTTA GGACCTAATG GTGCAGGCAA AAGTACTGCT
ATTAAAATAT TAACTACCGT CTCACGACCA ACTTCAGGTG AAATACTGGT CAATGGATAT
AACACCGCTA AAGAAGAGCA TCGGGTTAGA GATGCCATGG GAGTAGTGTT CCAAGATCAC
ACCCTAGATA AAGAACTAAC AGCTTATGAA AATTTATATT ATCACACAGT GTTATACGGG
GTCCCAAAAA ATGAACGAAA AGACCGTATT CAAACCATGT TAGATAATGT GGGTTTATGG
GAAAGAAGAA ACAGTTTAGT AAAGACATTT TCCGGTGGTA TGAAAAGACG AGTAGAAATA
GTCCGGGCTT TACTCCATTA CCCCAAAATA CTGATATTAG ATGAACCCAC TTCAGGTTTA
GACGCTCAAA CCAGGTTTTT CCTGTGGAAT CACATTGACG AGATAAATCG GGACTATAAT
ATTACAGTTT TCCTAACTAC CCACAACTTA GAAGAAGCAG AGAAAGTGGC TGAAAATATT
GCCATAATTG ATCAAGGTCA AATCCTAGCC ATGGGCAGTT CAAAAGAAAT CAAGGCTCAA
ACGGAAACAG AATCATTAGA ACGAGCCTTT TTAGAAATCA CTGGTTATGA TTTAAGATAT
TAA
 
Protein sequence
MSQKQLDQEA NSENNKIIQV NQLVKQYEGG VTAVDNISFQ VDEGEIFAFL GPNGAGKSTA 
IKILTTVSRP TSGEILVNGY NTAKEEHRVR DAMGVVFQDH TLDKELTAYE NLYYHTVLYG
VPKNERKDRI QTMLDNVGLW ERRNSLVKTF SGGMKRRVEI VRALLHYPKI LILDEPTSGL
DAQTRFFLWN HIDEINRDYN ITVFLTTHNL EEAEKVAENI AIIDQGQILA MGSSKEIKAQ
TETESLERAF LEITGYDLRY