Gene Nther_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0904 
Symbol 
ID6314956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp955167 
End bp956354 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content36% 
IMG OID642643277 
ProductRadical SAM domain protein 
Protein accessionYP_001917077 
Protein GI188585532 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0776722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACATGG AAAGGAGAAA ATTCCTTTCT AAGACTGGAA AAATATTAGG GTTAAGTTCT 
ACTTTGTCTG CTTTGTTATT ACAAGGGTGT GACATGTTCC CTTGGTCTGA AGATACAGAC
CCTCTAAAAG GAGATGGAAC AGATACTGGT CTTGATATAA CTAATGACAT AAAAGACTTA
AAAGAGGCCA TGTTTTATAA ATCATTAAAT GAAAATCGTG TAAAATGTCA GGTCTGCTTT
AGAGAATGTG TAATTAAACC TTCGGAAAGA GGATTTTGCC GGAATAGGGA AAATAAAGAA
GGTAAACTCT ACAACATTGT CTATGGCAGA CCTTCTGCTG TTCAAATTGA TCCAGTAGAA
AAGGAACCAC AACATCATTT TATGCCAGGC AGCTATATTT TTTGTGTAGG GACTGCAGGC
TGTAACTATC GATGTAAATA CTGTCACAAT TATCAATTGT CTCAACAGAG TATTGATGAT
TTGCGTTATG AAAAACTACT CCCTGAAGAT TTAGTAGAAC AAGCACTGGA GCAAAATGTA
GCTGCAATCT CATTCACTTA TAATGAGCCT ACTTCTCTTT ATGAATACAT GTACGATACA
GCTAAGTTGG CCCAGGAACA TGAAATAGGA GTTATGTTCC ATTCCAATGG TTCTATGAGT
ACAGAACCCC TGAAAAAGTT GTTAAAATAT GTGGATTCAA CGACTATTGA CTTAAAAGGA
TTTGAAGACA ATTTTTATCA GGATATTTCA CAGGCTGAGT TATCACCAGT TTTAGACACT
CTTAAAACTA TTGTTGATGC AGGGGTTTGG TTGGAAATAG TTAACCTAAT GGTGACAGAT
TTAAATGATG ATCCTGAAGT AGTAAAAGAT ATGTGCACCT GGATAAAAGA AGAGTTAGGT
GAAGATATAC CTTTACACTT TACCAGATTT ACACCTAGCT ATAAAATGAC TGATACCTCA
CCTACTCCTG TAGAACGTCT GGAAAAAGCC AGAGAAATAG CAATAGACTG TGGTTTGCGT
TTTGTAACCA TTGGCAATGT TCCCGGTCAC CAGTATAATT CCACTTATTG CCCTGAATGT
CACCAATCTC TCATTAAAAG AGATCACTTT TCCGTACATG AAATAAATTT AGAAGATGGA
AAATGCGAAA ACTGTGGATT AGATATCCCT GGTGTTTGGA GCATCTAA
 
Protein sequence
MHMERRKFLS KTGKILGLSS TLSALLLQGC DMFPWSEDTD PLKGDGTDTG LDITNDIKDL 
KEAMFYKSLN ENRVKCQVCF RECVIKPSER GFCRNRENKE GKLYNIVYGR PSAVQIDPVE
KEPQHHFMPG SYIFCVGTAG CNYRCKYCHN YQLSQQSIDD LRYEKLLPED LVEQALEQNV
AAISFTYNEP TSLYEYMYDT AKLAQEHEIG VMFHSNGSMS TEPLKKLLKY VDSTTIDLKG
FEDNFYQDIS QAELSPVLDT LKTIVDAGVW LEIVNLMVTD LNDDPEVVKD MCTWIKEELG
EDIPLHFTRF TPSYKMTDTS PTPVERLEKA REIAIDCGLR FVTIGNVPGH QYNSTYCPEC
HQSLIKRDHF SVHEINLEDG KCENCGLDIP GVWSI