Gene Nther_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0872 
Symbol 
ID6314564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp920604 
End bp921251 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content33% 
IMG OID642643245 
ProductSNARE associated Golgi protein 
Protein accessionYP_001917045 
Protein GI188585500 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCC TGAGAATAAT TATAGTTTTG TTAATAGGAG TGGGAACAGG CAGCTATTAT 
TTATATCTTA ATGATATAAT CACAGCTGAA AATATCTACT TATTTCTTGA AAATTACGCT
TATTTAGCAC CTTTATTATA TTTTCTTATC CATGTCATTC GTCCTTTTAC CATGTTACCA
TCTTCTATCC TATCAGTAGT TGCTGGTCTC ACCTTTGGTT CCTGGATCGG ATTTTTAATT
TGTATTACCG GTTTCTTACT GGGAACATCA ACTGCTTATA TTATGGGAAA AGTTTTTCAA
CTCAAGTGGC TAATCTCTCG CTATCCCCAG AGCCAACAAC TTATCCAGGT ACTTAAAGAA
AATTCCACTG ATAATATCCT ACTGGGAATC AGTTTAAGAT TTGTGCCAAT TTTCCCTTCA
GATTTAGTTA GCTTTGCCTT TGGAGTTTGT AAAATAAGAT ATCGAGAATT TGCTCTAGGA
ACCTTAATAG GATCATTTCC GGGACTATTT ATGTTTTATT ATGCTGGAAT TCAGTTTCAA
CAGCAAAGCT ATTTTAATCT AATCTTGATT TTAATCGCAT TTGTTATCCT CACCTTGATA
TTTTGGAAAA AGAAACAATA TTATAAAGAA AAGTTTGGTA TAAAGTAG
 
Protein sequence
MTILRIIIVL LIGVGTGSYY LYLNDIITAE NIYLFLENYA YLAPLLYFLI HVIRPFTMLP 
SSILSVVAGL TFGSWIGFLI CITGFLLGTS TAYIMGKVFQ LKWLISRYPQ SQQLIQVLKE
NSTDNILLGI SLRFVPIFPS DLVSFAFGVC KIRYREFALG TLIGSFPGLF MFYYAGIQFQ
QQSYFNLILI LIAFVILTLI FWKKKQYYKE KFGIK