Gene Nther_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0870 
Symbol 
ID6314551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp917526 
End bp919130 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content39% 
IMG OID642643243 
ProductYidE/YbjL duplication 
Protein accessionYP_001917043 
Protein GI188585498 
COG category[R] General function prediction only 
COG ID[COG2985] Predicted permease 
TIGRFAM ID[TIGR01625] AspT/YidE/YbjL antiporter duplication domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAT TCCATGAAAC ACCAGTATTA ACAATATTCA CTATCATTTT ATTGGGATTA 
TTACTGGGAA GCATACAATT CAAAGGTTTG AAATTAGGAG CTTCAGGAGT TCTATTGGTT
GCATTATTAA TGGGACATTT TGGCTTTGAA ATACCTAAGG TAGCTCAGGA TTTAGGACTT
GCTTTATTTG TACTCTCGGT AGGTTTAAAA GCGGGGCCTA GATTTTTCCG AATGCTAAAA
CGTAAAGGTA TAGCATTCAG CGGAATAGGA CTTGCTATAG TTATCTCTAC CGGTTTAATT
ACATTAATGT TATCAAAATT ATTAAACATT CCAGCACCCC TTGGCATAGG ATTGATGACA
GGTGCCCTAA CAAGTACACC GGGACTGGCA GCTGCCATTG AAGCCACCGG AGACCCTATG
GCTTCTGTTG GTTATGGGAT TGCCTATCCC TTTGGTGTCA TTGCAGTTGT TATGTTTGTC
CAACTGGTTC CCAAAATTAA AAAAGACAGC TTTTTAGAAG CTTTACAGAG TGCTGAAGCA
GATAAAGAAA GGAAACAACA GAGAAAGAAC CTGATTTCCA AAGCTTTCAG AGTAGAAAAC
CCTGAACTAC ATAAGAAAAC TTTAGCGGAA ATCAAACTTC AAAAAAAGGC TGAAGTAATT
ATCAGCAGGA TTTTTAGACA CGATAGGAGT TTTGTCGGCA GAAATGATGC TGTGCTATTA
CAGGGTGATC ACATTAATGT TGTAGGCACT TCCGAAGAAC TCAAAAAGGT TGATGATTAT
TTTGGACCTA GTGTAGAAAT TAATGATAAA ACAAAGGAAG AAACAGATAC AGAAGTTGAA
AACATTATTA TGAATAGGGA TGATTTAGCA GGGAAAACCC TGCAAGAGTT AAACCTAAGA
CATAATCCAG GTGTAACGAT TACCAGAGTA GAGCGTAGTG GTATAGAATT TTTACCTAAA
CCCGGAAAAA CACTTGATAA GGGTGATATT TGTACCGCAG TAGGGACAGA TAAATCTTTA
AAAGAACTAA AAGATTTGTT TGCCTCGAAA CATCTGCAGG TATCCGATGT AGACATGCTT
CCTATTAGTG TTTTCCTATT GAGCGGAATC TTACTGGGAA TGATACCTAT ATTTATTCCA
GGACTTGGTA CTATACAAAT TGGAGTAGCA GGAGGTCCCT TATTTGCAGG GTTAATCGCA
TCTCACTTTG GAAGGATCGG ACCTCTAAAG GCCAGATTTA ATAGTTCAGG TTTAAATACC
ATCAATAGCT TGGGCTTAAC TCTCTTTTTG GCAGGAGCCG GAACTTCCGC CGGCTCAGAT
CTTGTTACAG TCATAGCGAA ACACGGTATT GGAATATTTG CCAGTGGGGC AGTTATCACC
CTGGTACCTT TAATCATTTC TGCATGGCTA GTTCAAAGAG TATTTAAACT GAATTTGGTG
CATGGTTTAG GTGCTATTTG TGGTGGTATG ACAAGTACTC CTGGATTAGG AGCTTTAAAT
GATATTACTG ATTCAGAAGA ACCTTCCGTC GCCTATGCAG CTGTTTATCC ACTAGCTTTA
ATACTTGTAG CAATTTCATC CCAGTTATTA GCACTTCTTA TTTAA
 
Protein sequence
MSIFHETPVL TIFTIILLGL LLGSIQFKGL KLGASGVLLV ALLMGHFGFE IPKVAQDLGL 
ALFVLSVGLK AGPRFFRMLK RKGIAFSGIG LAIVISTGLI TLMLSKLLNI PAPLGIGLMT
GALTSTPGLA AAIEATGDPM ASVGYGIAYP FGVIAVVMFV QLVPKIKKDS FLEALQSAEA
DKERKQQRKN LISKAFRVEN PELHKKTLAE IKLQKKAEVI ISRIFRHDRS FVGRNDAVLL
QGDHINVVGT SEELKKVDDY FGPSVEINDK TKEETDTEVE NIIMNRDDLA GKTLQELNLR
HNPGVTITRV ERSGIEFLPK PGKTLDKGDI CTAVGTDKSL KELKDLFASK HLQVSDVDML
PISVFLLSGI LLGMIPIFIP GLGTIQIGVA GGPLFAGLIA SHFGRIGPLK ARFNSSGLNT
INSLGLTLFL AGAGTSAGSD LVTVIAKHGI GIFASGAVIT LVPLIISAWL VQRVFKLNLV
HGLGAICGGM TSTPGLGALN DITDSEEPSV AYAAVYPLAL ILVAISSQLL ALLI