| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0788 |
|---|
| Symbol | |
|---|
| ID | 6314587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 818982 |
|---|
| End bp | 820988 |
|---|
| Gene Length | 2007 bp |
|---|
| Protein Length | 668 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642643163 |
|---|
| Product | ATPase associated with various cellular activities AAA_5 |
|---|
| Protein accession | YP_001916963 |
|---|
| Protein GI | 188585418 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1401] GTPase subunit of restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00130676 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATTG TTAATAGATT TGATGAAAAG TTTAAACAAC GGCAAACTTC ATATAAGATG
GTTACTGTTT TAGCATTATT GGAAAATGTA ACTACAGATG GGAGTGCAGA CTTCGATAAT
GTTGTTAACA GTTTTTTGAA CTTTTATTTA GATAGACAAG AGAAAGGTAA GAATCCAGAA
ATTGAAAGAG CTAAAATGTC TATACCTGAA CAACTTTCTT CATCTCAAAT TAAGAATACT
ATATTAAAAG GTCCTGTTAC TCACTTAGAA GAGCTCATAG AATTTGATCC AGAAAACAAT
CAAATAAAAT TTTCAGATAA TACATATAAA GATCTTAATC AAAATGATAA CAGAATGGAG
TTAAAAAAAG TAGCTTATAA GCATCTTTAT CAATATTACA AAAATATAGA TAATAATTGG
ATTAAGTTAG AAGATTTGTC TGACTTAGAT CGTGGGTACC CAGTAAATGC AAATGACATT
TCTTCATTAT CAGAACAAAA CTCAATTAAA GGAATTCATC CAGTTGATTC ACAAGAATTC
CAAGGTACTA TAATTTTATG TACAATTAGT GGACAAGAAT ATCCTAATGA GTGGCTGGAT
GCAAATAAAC AGTTTTTAAA ATATTATTTA GAGGGTCGAA GGGATAAAAA TACTGGAATA
AAAAAATATA ACCAAAATTC CAAAAATAAT CAATCTGTCA TAAAGTCTAA AGAAGAAGGA
TATCCTATTT TGGCATTTGT CAGATATTCT AAAAACTCAT ACTTTTACTA TGAAGGTCAA
TTTGTATTTG AAGAAATCAG AAGAGATGAA CAAGAACATC CTTATTTTGT TTTAAAAAGA
CAAGATCAAG CGAGTAATGA AATAGAATTT AATCAATCTG TAAATACATG GGAGTCAATG
AATTTTATTA CAGAAGACAA CAGCGAATAT AATGGCTATA GCGAATATAA TAGCTTTGAT
GTTGAAAGTC TTAATGAAGT CTATCCCCAT ATTATTTCTT TCATTAGAAA TAGAGGTTTT
GTTTTCTCTG ATGACTTAAT AAAAAATTTT TTATTAGCTC TAAAAAGTAA ACCTTTTGTT
ATATTAGCAG GTTTATCAGG AACAGGAAAA AGTAAATTAG TAGAATTAGT GGCCAATTCA
CTAGGAGCAA CTAGAGAAAA TGGACAGTTT ACTCTTATTC CAGTACGTCC AGATTGGAAT
GATAGTACTG ATTTACTAGG TTATAAAAAC TTGCAAGGTG ATTTTATTGA AGGTGAACTC
ACAAAAGTGA TTAGAAAAGC GAAAGCAAAT CAAGATCACC CTTATATTGT CTGTTTAGAT
GAAATGAACT TAGCAAGAGT GGAATACTAT TTTAGCGATA TCTTAAGTGT TATGGAAACA
CGGAAAAAAC AAGGTGAAAG AATAATAACT GCACCCATGC ATGTTGAAGG ATTAGATGAT
TCCCTAACTT TCCCGGACAA TTTATACATT GTTGGTACTG TAAACATGGA TGAAACTACT
CATTCTTTTA GTCCTAAGGT TCTCGATCGA GCTAATACAA TTGAATTTAA TGAAGTAAAT
TTAGACTATC TCCCTGATCA TGAAGGAGAA GAAATATTAC CCAAAAAAGC TCATAACAAT
ATATTTAAAA CTGAATATAT AAAGTTAAAA GATTGCTATT ATGGAAATGA AGATTTTATC
AAACAGCAAG TAGAGTTTTT AAAACAATTA AACTCAATTC TTAATAAACC AGGTTTACAA
CTTCAAATAG GATATCGTAT ACGAGATGAA TTTTGCTTTT ATTTGTTAAA TAATAATAAA
TTTAAATTAC TTCCTGAAAA CACTGCTAAA GACTTTCAAA TAATGCAAAA AATATTGCCA
AGAATTCAGG GGAGCTCATT AAAAATTGAA TCCGTATTAA AAGAACTGAT AGAACTGTGT
TCAGACAGTT TGCCACACAG TAAAGAAAAA GCAGAATTTA TGTTAGAAAG GTTTGAAGAA
GATGGCTTCA CTTCATTCTG GCTCTAA
|
|---|
| Protein sequence | MSIVNRFDEK FKQRQTSYKM VTVLALLENV TTDGSADFDN VVNSFLNFYL DRQEKGKNPE
IERAKMSIPE QLSSSQIKNT ILKGPVTHLE ELIEFDPENN QIKFSDNTYK DLNQNDNRME
LKKVAYKHLY QYYKNIDNNW IKLEDLSDLD RGYPVNANDI SSLSEQNSIK GIHPVDSQEF
QGTIILCTIS GQEYPNEWLD ANKQFLKYYL EGRRDKNTGI KKYNQNSKNN QSVIKSKEEG
YPILAFVRYS KNSYFYYEGQ FVFEEIRRDE QEHPYFVLKR QDQASNEIEF NQSVNTWESM
NFITEDNSEY NGYSEYNSFD VESLNEVYPH IISFIRNRGF VFSDDLIKNF LLALKSKPFV
ILAGLSGTGK SKLVELVANS LGATRENGQF TLIPVRPDWN DSTDLLGYKN LQGDFIEGEL
TKVIRKAKAN QDHPYIVCLD EMNLARVEYY FSDILSVMET RKKQGERIIT APMHVEGLDD
SLTFPDNLYI VGTVNMDETT HSFSPKVLDR ANTIEFNEVN LDYLPDHEGE EILPKKAHNN
IFKTEYIKLK DCYYGNEDFI KQQVEFLKQL NSILNKPGLQ LQIGYRIRDE FCFYLLNNNK
FKLLPENTAK DFQIMQKILP RIQGSSLKIE SVLKELIELC SDSLPHSKEK AEFMLERFEE
DGFTSFWL
|
|---|
| |