| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0777 |
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| Symbol | |
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| ID | 6315759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 809056 |
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| End bp | 811080 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642643152 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001916952 |
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| Protein GI | 188585407 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.022498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA AGAAAATGAT TTTCTTTTCA TTAGATCCTG CATCTAAAGA AAAATATACC
AAGGATTTAC AAAGTTTTTT TGGAGACTAT ATAGAAATTG AATCGTATTC CCTAAAAGAG
GGGATTAATC ATAAAATAAA TGGCGATTTA CTGATGATTT CTACTCCTTT ACTTAATGAG
TATGTAAAAA AATTTGTTTC TTCTGATATA GAAGTAATTT ATCCAACCAG GACAATATTA
AAAAAGGGAT TTAAAGAACT AAAAAAGTTA GAAAAAGGAC AACGAGCCAT GCTTGTTAGT
AATAGTAGTA CCTTTGCTTT AGATCTATTG TCATTATTGC ATCGAATAGG AATTGATCAT
ATACAATTTG ATATATTCTA TCCAGATATG GGACAAGTGC CCGATTTGGA TTTAGCGGTT
ACCCCAGGTC AAACTTTCTA TGTACCATCA AAAGTGAATC AGGTAATTGA TATTGGGTGG
CGCGAATTTG ATATATCAAC ATTATGGGAA ATTGCCCTTA AGCTCAAAAT TAATGATGAA
ACAATATTTG ATAGTGTCAA AGCTCACAGC AAAAAAATCG TTCCTGTAAG TTATGGAATG
CACTCGATAT TGGATGATAT CACCAAATCA GAGGCCAAAT TATCTATTAT TTTAGATGAG
GTGGACGATG CTATCCTCAT GACTAATAAC AGAGGTAGTA TTCTTCATAA CAATTCTGCA
TTAGTTAACA TGTTAAACAT TAATAAAACA GATTTGCAAG GTACCAATGT TGATGATGAA
ACTATTCTAG CTGAAATTCA ACAAAAATTA ATTAATAAAA ACAATGTGAA TAACCAGGTC
ATAGATATTG ACCTTTTAGA TTCTTCTTTA CTCGTTACCA AAAAACCCTT AATGGACCAC
AATAAACCAT TTGGTTATGT TTATATTATG AAAAATGTAA ACAATATCCG AAGACTAGAA
AATAAAGTAA GAAAAACTTT AGCTGAAAAA GGCCATTTAG CAAGATATAC TTTTGATTCC
ATTGTTGGAA AAAGCACTGA ACTAATTAAA TGTAAACAAA AAGGTATGAA GATAGCAAGG
TTAGACAAAC CTGTACTGAT TATAGGTCAA ACTGGTACTG GAAAAGAGTT GTTTGCACAA
TCAATTCACA ACTACTCTGC AAGAAAGGAT AATCCTTTTG TTGCTGTGAA CTGTGCAGCA
TTACATTCCG AACTATTAGA AAGTGAATTG TTTGGTTATG AAGAGGGTGC TTTTACAGGT
GCCAAAAAAG GTGGAAAAGA AGGATTGTTT GAACTTGCCC ATGGAGGAAC TCTTTTTTTA
GATGAAATAG GTGACATCTC TTCAGAGCTG CAAGCTAAAC TTCTTCGAGT ATTACAGGAA
AAGGAAATAA TGAGAATTGG TGGAACTAAG ACATTTCCTG TTGATGTTAG AATTATTGCA
GCTACCAATA AGGATTTTAA GAAACTTATG AGACAAGGCA AGCTAAGAAA AGATTTATAT
TATAGATTGA GTGTTCTAAA TCTAAAACTT CCCTCTTTAA ATGATTTACA AGAAGATATT
CCGCTACTAG TAGAATTTTT TTTACAAAAA ACCGGAGTTC GAAAAAGTAT GGAAAAAGAA
GTCATGGATA AATTAGTTAA TCATGATTGG GACGGCAATA TAAGGGAATT GGAAAACTGT
GTTGAATATC TTGCCTATAT GTCTGATGAT TCCATTAAGT TAGAAGATCT TCCGGATGAT
TTCTATGAAG ACACTGCTGA TTATGAAACT ACTAATGAAA TTGACCATTT TCCGGAACTT
CTTCAAGAAG AAAAAATGAT TTCAGATTCA ATACTCAAAA TAATTAAAAT CAGAAGTGCA
GGTCGAAGGA CTATAAAAGA ACTATTAGAA AATCAAGGGA TTAAAACTTC AGAACATGAA
ATACGTAAAA TATTAAATTA TCTACAACAC AAAGGTTTTA TTACCTACGG AAAAGGTCGA
AAGGGGGTAG AGTTAACTCA TTCTGGGAAA AAACTAAATC ATTAA
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| Protein sequence | MKKKKMIFFS LDPASKEKYT KDLQSFFGDY IEIESYSLKE GINHKINGDL LMISTPLLNE
YVKKFVSSDI EVIYPTRTIL KKGFKELKKL EKGQRAMLVS NSSTFALDLL SLLHRIGIDH
IQFDIFYPDM GQVPDLDLAV TPGQTFYVPS KVNQVIDIGW REFDISTLWE IALKLKINDE
TIFDSVKAHS KKIVPVSYGM HSILDDITKS EAKLSIILDE VDDAILMTNN RGSILHNNSA
LVNMLNINKT DLQGTNVDDE TILAEIQQKL INKNNVNNQV IDIDLLDSSL LVTKKPLMDH
NKPFGYVYIM KNVNNIRRLE NKVRKTLAEK GHLARYTFDS IVGKSTELIK CKQKGMKIAR
LDKPVLIIGQ TGTGKELFAQ SIHNYSARKD NPFVAVNCAA LHSELLESEL FGYEEGAFTG
AKKGGKEGLF ELAHGGTLFL DEIGDISSEL QAKLLRVLQE KEIMRIGGTK TFPVDVRIIA
ATNKDFKKLM RQGKLRKDLY YRLSVLNLKL PSLNDLQEDI PLLVEFFLQK TGVRKSMEKE
VMDKLVNHDW DGNIRELENC VEYLAYMSDD SIKLEDLPDD FYEDTADYET TNEIDHFPEL
LQEEKMISDS ILKIIKIRSA GRRTIKELLE NQGIKTSEHE IRKILNYLQH KGFITYGKGR
KGVELTHSGK KLNH
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