Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0750 |
Symbol | |
ID | 6315487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 778799 |
End bp | 779509 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642643128 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001916928 |
Protein GI | 188585383 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0322855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGCT CAAATAATGA ATTTAATAAT AGTGATAACA GAAAACAAGA GTTTTTGATG ACAGCTTTAG AACTGTTTTA TGAAAAAGGT TACGAAAAAA CTACCATCAA GGATATAATT AACAAAATGG ACGTGTCTAA AGGAGCTTTT TATCATTATT TTGAATCCAA AGAAGATGTG ATTACATCAC TGGCTAAAGA ATACGCTGAT AGAGCACTAA GTATTATTAA AAGGATCAAT AGTAGAAATG ATTTATCTGC AGTTAATAAG ATCAATCGAA TCTTCCAGTC AATTAATGAA TACAAGGGGA GTTCTGAAGA AAAAAGACAC AAGTTAAAAG ACGCATTTTA TGGAGAAGAA AATCTGAAGC TAGAGAAAAA GATATTTAAT TCATTTAAAG AAGAAACAAT TGATCTATTT CAAGAGATAA TTGAAGAAGG AATAGCAGAA GGGTCCATTG AAGAACCGGT TTGTTCCAGG GAGCTAGCTG AGTTTATGTT ATACACTATT AAAAGTTTAA ATTCTTCTAT AGATGAACTG GTACACTATA TGAATGATGA GGATAACGAT TTTGGCTATG AAGAGTTTAC TAAAAGACTT GATAACAAGT TGAGATTTTA CGAAGAAGCT TTTTCCAGGG TATTTAATCT ACAAAATGAT ACTATTAAGT TACGGGAATC TTATCTTAAT AGATTTGTCA AAGGAAGTTA A
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Protein sequence | MISSNNEFNN SDNRKQEFLM TALELFYEKG YEKTTIKDII NKMDVSKGAF YHYFESKEDV ITSLAKEYAD RALSIIKRIN SRNDLSAVNK INRIFQSINE YKGSSEEKRH KLKDAFYGEE NLKLEKKIFN SFKEETIDLF QEIIEEGIAE GSIEEPVCSR ELAEFMLYTI KSLNSSIDEL VHYMNDEDND FGYEEFTKRL DNKLRFYEEA FSRVFNLQND TIKLRESYLN RFVKGS
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