Gene Nther_0697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0697 
Symbol 
ID6316399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp722793 
End bp724061 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content37% 
IMG OID642643077 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_001916877 
Protein GI188585332 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT GGTACAGTTT AATAGACAAG ATTTATTCCA AAAAGAATCT AGAAGACGCC 
TACCGCAGGG TCAGAGCTAA CAAAGGTAAA CCCGGCATAG ACCAGGTAAC CGTGGAGGCT
TATGGCTCCA ACCTAGAAGA AAATCTGGAA ACCCTTCATC ATGACCTTAA AATTGGCGCA
TACAAACCAC AACCTGTGAG GCGAGTTAAG ATACCCAAAC CAGATGGAAG TACTCGCCCA
TTAGGGATTC CAACCGTAAA AGACAGGGTA GTCCAACAAG CAACGTTAAA TATACTTCAA
CCGATTTTTG ATCCAGACTT CCACCCGTCA AGCTACGGAT ACAGGCCTAA TCGCTCATGT
CACAAAGCAA TAGCTAAATC AGAACAGTTC ATTAATAAAT ACAATCTAAG ACATGTAGTA
GATATGGACC TATCTAAATG CTTTGATAAA TTAAACCATG AGTTGATTAT CGAAGAAGTA
GCCAAGAAAG TTAGTGATGG AAGTGTTCTC AAATTAATAA AGAAATTTTT GAAGTCCGGA
GTAATGGAAG ATGGAGCCAT AGAAGACACA GAAATAGGGA GCCCTCAAGG TGGAGTGATA
TCACCACTAC TAACCAACAT TTACCTAGAC AGATTTGATA AAGAAATGAA GAGTCGCAAT
ATCCGAATAG TAAGATATGC CGATGATATT TTAATATTCG CCTACACACC AAGACAAGCG
AAAAGATATA AAGATATAGC TACTGAAATA TTAGAAGACG AATTAAAACT AACAGTTAAT
AAAGAGAAAA CTCACATAAC AAATGACCGC AAAGGTGTTC CCTACCTAGG AGTTATCATA
AGGAGTCAAA ACATATCCAT CCAGCCTGAA AAGATACAGA AATTCAAAGA AAAAGTCAGA
ACTCTTACAC CAAGAAATCA TGGTAGAAAT CTATCCGAAA TCATAAAAGA GCTAAATCCA
GTATTAAGAG GATGGGCAAA TTACTTCCGA ATAGCCAATT GTAAGAAACA ATTTGAGAAC
TTAATGAAAT GGATTAGAAG AAGACTTAGG ATGAAGAAAA TGCGAGAATG GAAAAGTTGG
AAACAACTAC ACAAAACTCT TCGCAGAAAA GGCTACAAAG GGGAATTTGA GAAAATCTCC
ATGAATAAAT GGAGAAACTC ATCAAGTCCT CTCATAAGTT TAGCACTACC CAATAAGTGG
TTTGACGAGA TAGGTCTAAT TAATATTAGT ACCTATCAAG TTGGTATTTT GCATCACTTT
AGAGAGTGA
 
Protein sequence
MKKWYSLIDK IYSKKNLEDA YRRVRANKGK PGIDQVTVEA YGSNLEENLE TLHHDLKIGA 
YKPQPVRRVK IPKPDGSTRP LGIPTVKDRV VQQATLNILQ PIFDPDFHPS SYGYRPNRSC
HKAIAKSEQF INKYNLRHVV DMDLSKCFDK LNHELIIEEV AKKVSDGSVL KLIKKFLKSG
VMEDGAIEDT EIGSPQGGVI SPLLTNIYLD RFDKEMKSRN IRIVRYADDI LIFAYTPRQA
KRYKDIATEI LEDELKLTVN KEKTHITNDR KGVPYLGVII RSQNISIQPE KIQKFKEKVR
TLTPRNHGRN LSEIIKELNP VLRGWANYFR IANCKKQFEN LMKWIRRRLR MKKMREWKSW
KQLHKTLRRK GYKGEFEKIS MNKWRNSSSP LISLALPNKW FDEIGLINIS TYQVGILHHF
RE