Gene Nther_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0689 
Symbol 
ID6316391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp714369 
End bp714929 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content37% 
IMG OID642643070 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_001916870 
Protein GI188585325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA AACCATATCG TTGTCCTCGT AATTCCTTGC GATATACTGT CCAAGAGACG 
GATACAATTT ATGATATAGC CAAGCATTAT GATATTTCTT TACATGAACT TAAAAAAGCC
AATCGACATA TTGAAGATTT AGAAGTTATC TGTCCTGGTG ATGTATTGTG CATACCAAGG
GAAATTGAGC CCAGAAGAGC AAAAGTCATC ATTGCCTTGA ATATTGGTAC AAATAAATTT
GGCTATACTG GAAAATGGGA AGCGGCTCTT TATAAAGGTG CCATACCTGC CGAAGAAACA
GAAGGACGGT TCACGGAATG GAAACAAGCC GACAAAAATA TCGTGACTTT TGAGTTACCC
GAGGAAGTCC GTAAAAGTTT TGAAGTACCT TTTAGCATAC CTGAAGACAC TTATGTCAGG
ATCAGAACTC TTGGAAATGA TGTTTTTCCT GTGTTTGACC TGGTTACAGA GCCGTTTACT
CTTGTTAGAA ATAAAAAAAT AATTGTTCCT ATAAATTTTA TTTCCAAAGC TACTATTTTG
CCATTAGCTA ATAAAAATTA A
 
Protein sequence
MSRKPYRCPR NSLRYTVQET DTIYDIAKHY DISLHELKKA NRHIEDLEVI CPGDVLCIPR 
EIEPRRAKVI IALNIGTNKF GYTGKWEAAL YKGAIPAEET EGRFTEWKQA DKNIVTFELP
EEVRKSFEVP FSIPEDTYVR IRTLGNDVFP VFDLVTEPFT LVRNKKIIVP INFISKATIL
PLANKN