Gene Nther_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0624 
Symbol 
ID6316795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp648883 
End bp650310 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content39% 
IMG OID642643007 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_001916807 
Protein GI188585262 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTA CCAATAAAGG AATGAAGTGC CGCCAACTTC TGACAGGCGA AAGCTGCAAA 
GAAGGCTCAC CGCAGAAGAA TAGTGCGGAA CACGAAGGAT ATGCGGGAGT GCACAGTTCT
TTAAGGATAA CTGAAAACAA CATCTCCAAT GCAAACTTGT CGAAGGGGAA TTTGCTAGAG
GAAATTTTGG ATAGAGACAA CATGAATAAA GCATTCAAGA AAATAAAATC CAACAAAGGC
TCTCACGGGA TTGATGGGAT GGGAGTAGAT GAACTTCTAC AATATCTCAA AGAAAACGGG
GACCACCTCA GGCAAAGAGT CCTGGACGGT AAATACCGCC CTAATCCCGT CAGAAGGGTA
GAGATACCTA AAGAAGATGG GAAGAAAAGA AAATTAGGCA TACCTACAGT GGTAGACAGG
GTAATCCAAC AAGCAATAGC CCAAGTACTA TCTCCAATAT ATGAGGAGCA ATTCTCAGAT
AACAGCTATG GTTTTCGCCC TGGACGCAGT ACTCATGATG CAATTAAGAA AAGTCAACAA
AACATAAATG AAGGATACAA ATATGTAGTA GATATGGACT TGGAGAAATA CTTTGACACA
GTAAACCAGA GCAAATTGAT AGAAGTGCTA TCTAAGACAA TAAAAGACGG TCGAGTAATA
TCTCTTATCA ACAAATATCT AAGAGCAGGA GTAATGATCA AACACACCTA TAAGGATACA
GAAGTTGGCG TGCCCCAGGG CGGGCCTCTT AGCCCTATCC TCAGTAACAT AATGCTCCAC
GAATTGGATA AAGAACTTGA GAAAAGGGGG CACGAATTCG TCCGCTATGC GGACGACCTG
CTAATCTTTT GTAAAAGCAG AAGAAGTGCC GGACGCACCT TGAAGAACAT ACTACCCTTC
ATCGAAAATA AACTATTTCT CAAAGTAAAT AAAGATAAAA CTGTAGTTGC CTATGTAGGA
AAGGTAAGAT TTCTTGGGTT TGGCTTTTAC AGACATAAAG GAAAAGCCAG ATTAAGAGTT
CATCTTAAAT CAGTTACAAA GATGAGAACG AGAATAAAAG AACTCACATC TAGAAGTTAT
GGAATAAGCA ACGAAGCCAG AGCAAAGAAA CTTAGCCGAT ACATTATGGG TTGGGTTAAC
TACTTTAAAC CAGCTGATAT GAAGAATCTG TTAATAAATA CTGACAGTTG GATGAGAAGG
CGTATTCGCA TGATTTACTG GAAACAATGG AAGAAAGTGA GAACAAAATT TAAAATGCTC
AAGTTCTTTG GAGCCAATAA ATACAAAGCA TGGGAATATG CAAACACAAG AAAGGGCTAC
TGGAGAATTT CCAATAGCCC CGTCTTATCC AAATCCCTTG GAAATGATGT AATCAAAGGA
TTTGGTTTCC TATTCTTTTC GGAATATTAT CGACAAGTTA AAGCGTAA
 
Protein sequence
MTVTNKGMKC RQLLTGESCK EGSPQKNSAE HEGYAGVHSS LRITENNISN ANLSKGNLLE 
EILDRDNMNK AFKKIKSNKG SHGIDGMGVD ELLQYLKENG DHLRQRVLDG KYRPNPVRRV
EIPKEDGKKR KLGIPTVVDR VIQQAIAQVL SPIYEEQFSD NSYGFRPGRS THDAIKKSQQ
NINEGYKYVV DMDLEKYFDT VNQSKLIEVL SKTIKDGRVI SLINKYLRAG VMIKHTYKDT
EVGVPQGGPL SPILSNIMLH ELDKELEKRG HEFVRYADDL LIFCKSRRSA GRTLKNILPF
IENKLFLKVN KDKTVVAYVG KVRFLGFGFY RHKGKARLRV HLKSVTKMRT RIKELTSRSY
GISNEARAKK LSRYIMGWVN YFKPADMKNL LINTDSWMRR RIRMIYWKQW KKVRTKFKML
KFFGANKYKA WEYANTRKGY WRISNSPVLS KSLGNDVIKG FGFLFFSEYY RQVKA