Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0556 |
Symbol | |
ID | 6314666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 579245 |
End bp | 579760 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642642940 |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_001916740 |
Protein GI | 188585195 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00669649 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCTATT ACTATTACGA TAATAAACAC GGTTTACTCA AGGAACTGGT GATAAGACAT GTCCAGGAAA CTCTAGAATT TAAAGAAACC TTACTAGAGG AAATTGATAA TTATTCCGAA GAAGAAATCA AAAAGATTTC CCAAAGATTA TTTAATTTTT TAAAACAAAA GAGCAAAATT CTTAGTATTT TGACCATTGA AACATTAAAA TCCGGTTCAC AAGATCATAA TATTTTTCGA ATACTGCATC CTATTTACGA AAAAACTTTG AAAGATCTAG AAGAAAAAGG CTACAAAATA GATAATCATA CAGAACAGAT TCTAAACTTG TTTTTCTTTG GTACCATTCC TGTTACCTTA TTTATTGCAC TAAAGGAAAA ATGGTCCGAG TTTTATGGAA TAGACTCTGA CGAAACCGAA AAAATATTCC AAGCTAAAAT AGATGAATTT CATATAAACT TTTATCAAGC ATTAATTAAT GATAAAACTA ACACAAGCAA CTTAATTAAT AAGTGA
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Protein sequence | MIYYYYDNKH GLLKELVIRH VQETLEFKET LLEEIDNYSE EEIKKISQRL FNFLKQKSKI LSILTIETLK SGSQDHNIFR ILHPIYEKTL KDLEEKGYKI DNHTEQILNL FFFGTIPVTL FIALKEKWSE FYGIDSDETE KIFQAKIDEF HINFYQALIN DKTNTSNLIN K
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