Gene Nther_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0556 
Symbol 
ID6314666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp579245 
End bp579760 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content28% 
IMG OID642642940 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_001916740 
Protein GI188585195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00669649 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTATT ACTATTACGA TAATAAACAC GGTTTACTCA AGGAACTGGT GATAAGACAT 
GTCCAGGAAA CTCTAGAATT TAAAGAAACC TTACTAGAGG AAATTGATAA TTATTCCGAA
GAAGAAATCA AAAAGATTTC CCAAAGATTA TTTAATTTTT TAAAACAAAA GAGCAAAATT
CTTAGTATTT TGACCATTGA AACATTAAAA TCCGGTTCAC AAGATCATAA TATTTTTCGA
ATACTGCATC CTATTTACGA AAAAACTTTG AAAGATCTAG AAGAAAAAGG CTACAAAATA
GATAATCATA CAGAACAGAT TCTAAACTTG TTTTTCTTTG GTACCATTCC TGTTACCTTA
TTTATTGCAC TAAAGGAAAA ATGGTCCGAG TTTTATGGAA TAGACTCTGA CGAAACCGAA
AAAATATTCC AAGCTAAAAT AGATGAATTT CATATAAACT TTTATCAAGC ATTAATTAAT
GATAAAACTA ACACAAGCAA CTTAATTAAT AAGTGA
 
Protein sequence
MIYYYYDNKH GLLKELVIRH VQETLEFKET LLEEIDNYSE EEIKKISQRL FNFLKQKSKI 
LSILTIETLK SGSQDHNIFR ILHPIYEKTL KDLEEKGYKI DNHTEQILNL FFFGTIPVTL
FIALKEKWSE FYGIDSDETE KIFQAKIDEF HINFYQALIN DKTNTSNLIN K