| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0552 |
|---|
| Symbol | |
|---|
| ID | 6314662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 575907 |
|---|
| End bp | 576398 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642642936 |
|---|
| Product | FxsA cytoplasmic membrane protein |
|---|
| Protein accession | YP_001916736 |
|---|
| Protein GI | 188585191 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000293084 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.866587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTAA AAGCTTTATT ATTATTTACA ATTGTACCTT TAATTGAAGT CTGGTTCCTG
GTTAGACTCG GGCAGAATAT AGGAGCCTTT CCTACTATTT TTTTAGTGGC CGTGACAGGT
TTTATTGGGG TTTTCCTTGC TAAAAGCCAG GGTTTTATAG TGATACACAG ACTTCAAAGA
AAACTGGCAT CGGGAGCTTT TCCAACTGAT GAACTTTATA ACGGTGCATG TATTTTGATA
GGTGGGACAT TATTATTGAC TCCTGGACTA TTCACTGACT TATTTGGTTT AAGCTTGTTA
ATCCCTTTTA CCAGAGTGTT TTGGAAAATG GTGTTTTCCA GGATAATTAA AAAACTTATC
AAAGATGGTA AAGTTACCGT TCATACCAAT AATCAAGAAT TTTGGGGCAA TACAGGTTCG
GAGAAATCCG ATTATATTGA TACTGATTTT GAGGTCAATT ACGATGAAGA TAAGGATGAA
GATTATCATT AA
|
|---|
| Protein sequence | MLVKALLLFT IVPLIEVWFL VRLGQNIGAF PTIFLVAVTG FIGVFLAKSQ GFIVIHRLQR
KLASGAFPTD ELYNGACILI GGTLLLTPGL FTDLFGLSLL IPFTRVFWKM VFSRIIKKLI
KDGKVTVHTN NQEFWGNTGS EKSDYIDTDF EVNYDEDKDE DYH
|
|---|
| |