Gene Nther_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0546 
Symbol 
ID6316981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp567968 
End bp569272 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content34% 
IMG OID642642930 
Productputative signal-transduction protein with CBS and DRTGG domains 
Protein accessionYP_001916730 
Protein GI188585185 
COG category[K] Transcription 
COG ID[COG4109] Predicted transcriptional regulator containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.865084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTAAAC ACCGAGAATT AATAAAATAT ATCTCAGAAC TTCCCATAGG CACTAGAATC 
TCTGTACGTA AAATAGCTGG TGAATTGTCA GTGAGTGATG GTACAGCGTA TAGAGCTATT
AAAGATGCAG AAAATAAAGG ACTTGTCACT ACGATTCCTA AGACAGGTAC TATTAGGATT
AAAAACGAAG ATAAAAATTA CAATAATCAG GTTACTTTCG CTGAATTAAT TAAAATAGTC
AATGGTACTG TTCTAGGTGG AAGAGAAGGA CTATACAAGC CCTTGAATAA ATTTTTGATT
GGGGCCATGA AATTAAAGGA TATTTCTAGC TATATAAGTG ATGGATGTGT TTTAATTGTA
GGTAATAGAG AGGAAGCTCA CGAATTGGCA TTGAAAAAAG GTGCGGCTGT CTTGATATCT
GGAGGATTTG AGACAACTGA AGCCAATAAA AAATTAGCGG ATAAATATGC CTTACCAATA
ATAAAAAGCC CTTATGATAC TTACAAAATA GCTACATTAA TTAATCAAAC CTTGTATAAT
AAAATGGTGG AAAGTGAAAT TCTTCATGTC AAAGATATTA TTAATAATCA CCCACATTAT
TTGAATGAAA AAGATACCTA CCAAGATTGG GAACAACTTT TAGATAAAAC TGAACATAGT
AGATTTCCGG TTACAAATGA CGAAAATAAA GTGGTGGGAG TAGTTACATC CAAAGATGTC
ACAGGTAGGG ATTACAATGC TTCTATAGCC AAGCTAATGA CATCGAATCC TATTACTGTT
TCTCCTGAGA CTTTAGTAGC TTCTGTTGCT TACGTTATGG TTTGGCAAGG TATTGAAATG
ATACCAGTTG TTGATGAACA AGACAAGCTA ATAGGAATAG TCAGTCGACA TGATGTAATG
GAAGCCATGC AATTTGGTAA GGGTCACGAT AAAAATACTG CCACAGCAGC TCGTAAGATG
ATCCAAAACA ATTTTACAAA AGAGATATTT AATGAAGGTA TCACTTTATC AGGGTTTGTG
AATCCAGCTA TGACAGACCA AGTGGGTAGC ATGGACCCTT CAATATTAAC GGCGTTGCTT
ATTCAAGCAA GTTTATCAGC CCTAGGTCAC GATAATGTAT TTAATATAGT TTTGGAAAAC
TGTTCTTTTA ATTACGTGGC ACCAATACAA CTAGAGCAGA AAATAAATGT AACAGCCCGA
GTGCTGGAAA ATTCTCGCAA GTATGGAAAA GTGGATTTAG AGATCAAAGG TGATGAAAAA
GTGCTTTTAA AAGGTTTTAT TTCATGTCAA ATCTTAAAAA AATAA
 
Protein sequence
MTKHRELIKY ISELPIGTRI SVRKIAGELS VSDGTAYRAI KDAENKGLVT TIPKTGTIRI 
KNEDKNYNNQ VTFAELIKIV NGTVLGGREG LYKPLNKFLI GAMKLKDISS YISDGCVLIV
GNREEAHELA LKKGAAVLIS GGFETTEANK KLADKYALPI IKSPYDTYKI ATLINQTLYN
KMVESEILHV KDIINNHPHY LNEKDTYQDW EQLLDKTEHS RFPVTNDENK VVGVVTSKDV
TGRDYNASIA KLMTSNPITV SPETLVASVA YVMVWQGIEM IPVVDEQDKL IGIVSRHDVM
EAMQFGKGHD KNTATAARKM IQNNFTKEIF NEGITLSGFV NPAMTDQVGS MDPSILTALL
IQASLSALGH DNVFNIVLEN CSFNYVAPIQ LEQKINVTAR VLENSRKYGK VDLEIKGDEK
VLLKGFISCQ ILKK