| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0524 |
|---|
| Symbol | |
|---|
| ID | 6314816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 545987 |
|---|
| End bp | 546844 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642642908 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_001916708 |
|---|
| Protein GI | 188585163 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1994] Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.311607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.00535986 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATAGCTT TGAATTTTAG AGTTCATTGG ACTTTGATTT TATTTGGAAT TGTTTATCTA
TTTACCGGTT TTTTACAGGA GATAGGTATT TTTTTTGTTT TAGTAATATT ACATGAATTG
TCTCATACGA TTGTGGCTAT CAGCCACGGT TTTAAAGTAG AGGAAACAGT CCTTTATCCC
TTTGGAGGGC GGGCAAAAAT TGATGGATTA ATTGAAGAAG ATCCTTACAG GGAATTACAT
ATCGCCCTAG CTGGTCCTTT AACTAATATA TTACTTGCTA TTCTCTTTTT ATCCTTGGAT
CAATATTCAA TCTTTTCTGA AGAAATAATT TTGTTTGCCG TAAGGGCAAA TATAATCCTG
GCATTGTTCA ATTTATTTCC TGGCCTTCCC CTGGATGGTG GCAGAGTGTT GAGAGCTAGC
TTGAGTAAGA GAATGAGCTT TCGTGAAGCC ACTCATTACG CTTGTCAGGG TGGGAAACTG
GTTGGGATTT TACTAGTTAT CTTTGGAATT GTAGTGGGTA TAGTGTGGCA ATATATTAAT
ATAACTTTTT TCCTTGCCGG ATTATTTGTT TTTATAGTTG CTTTAAGAGA AGAAAAAGAG
GCAACTTATC TTTATTACAG GCATCTCACT AGAAAAAAGC AACTTTTGAC TCAAGAAGGA
GTCCTTCCCT GTGAAATCTT AATTGCCTTT GAAGCTACAT CATTAAAAGA AGTTACCAGT
CTATTTCGCC CCAAAAAATA TCATATTTTG CATGTAATTG ACGCAAACTG GGAAAAAAAG
GCTATCATAG AAGAAAAAGA TATTATTGAT GCCATGTTTA CTAGAGGTCC TCATATAAAA
ATTTCACAGA TTTTATGA
|
|---|
| Protein sequence | MIALNFRVHW TLILFGIVYL FTGFLQEIGI FFVLVILHEL SHTIVAISHG FKVEETVLYP
FGGRAKIDGL IEEDPYRELH IALAGPLTNI LLAILFLSLD QYSIFSEEII LFAVRANIIL
ALFNLFPGLP LDGGRVLRAS LSKRMSFREA THYACQGGKL VGILLVIFGI VVGIVWQYIN
ITFFLAGLFV FIVALREEKE ATYLYYRHLT RKKQLLTQEG VLPCEILIAF EATSLKEVTS
LFRPKKYHIL HVIDANWEKK AIIEEKDIID AMFTRGPHIK ISQIL
|
|---|
| |