Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0479 |
Symbol | |
ID | 6314781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 510018 |
End bp | 510932 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642642863 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001916663 |
Protein GI | 188585118 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.477815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAAAA ATGAACTGAA TGAAAGTACA AGTCAAGAAG TTCAATCTCA TGGCTTGTCT GAGGAAGTTG AAAGTCCTAT TAAACTTATA TGGAGACGCT TTAAGAGAAA TAGATTAGCT TTGATCGGGC TGATTGTTTT ATTAATACTG GTTTTTGGAG CGGTTTTTGC TCCATTTTTG ACGCCCCATG ATAGGGATAC TATTGACTAT GCTAATGCCG ATGCCGAGCC AGATAGTGAA CACATTCTAG GGACCGACGA CAGGGGCAGA GATATGTTTA CCAGGCTTTT GTATGCAGGT AGAGTTTCCT TATCTGTGGG TATTTTTGCT ACTTTACTGC GGATTTTGAT CGGTGTAACT TTGGGAGGTA TCGCAGGTTA CTACGGAGGA GCAGTTGATA ATGTTATCAT GCGGATAGCC GACGTCTTTA TGTCCTTTCC ATTTTTACCA ATTGCCTTAA CTTTCGTCGC CATACTGGGA CCAAGTATTT ACAATATCAT GCTGGTAATA GCAATTATTG GTTGGCCGGG TATCTGCAGG ATTGTAAGAG CGGAAATTCT ATCCTTGAGA GAACAAGAAT TTATTGAAGC TGCTAAAGCT CTAGGTCTTA GTGACCGTAC CCAAATAATA AAACACTTGA TTCCCAATAC TATGGCTCCA ATTATCGTTT CGGCTACTTT AGGTATAGCG GGTGCGATAT TAACTGAATC ATTTCTCAGC TATTTGGGAT TAGGGGTAAG TCCACCAACT CCCACCTGGG GCAATTTGCT ATCTGCTGCC CAAGAATCCT ATATTATTCG AAATAGATGG TGGCAGTGGG TACCACCGGG TATTATGATT TTCTTGGCTG TTATGAGTCT AAACTTACTG GGAGATGGGC TGAGAGATGC TCTTGATCCT AAACTTAAAG AGTAG
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Protein sequence | MAKNELNEST SQEVQSHGLS EEVESPIKLI WRRFKRNRLA LIGLIVLLIL VFGAVFAPFL TPHDRDTIDY ANADAEPDSE HILGTDDRGR DMFTRLLYAG RVSLSVGIFA TLLRILIGVT LGGIAGYYGG AVDNVIMRIA DVFMSFPFLP IALTFVAILG PSIYNIMLVI AIIGWPGICR IVRAEILSLR EQEFIEAAKA LGLSDRTQII KHLIPNTMAP IIVSATLGIA GAILTESFLS YLGLGVSPPT PTWGNLLSAA QESYIIRNRW WQWVPPGIMI FLAVMSLNLL GDGLRDALDP KLKE
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