Gene Nther_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0479 
Symbol 
ID6314781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp510018 
End bp510932 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content41% 
IMG OID642642863 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001916663 
Protein GI188585118 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.477815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAAAA ATGAACTGAA TGAAAGTACA AGTCAAGAAG TTCAATCTCA TGGCTTGTCT 
GAGGAAGTTG AAAGTCCTAT TAAACTTATA TGGAGACGCT TTAAGAGAAA TAGATTAGCT
TTGATCGGGC TGATTGTTTT ATTAATACTG GTTTTTGGAG CGGTTTTTGC TCCATTTTTG
ACGCCCCATG ATAGGGATAC TATTGACTAT GCTAATGCCG ATGCCGAGCC AGATAGTGAA
CACATTCTAG GGACCGACGA CAGGGGCAGA GATATGTTTA CCAGGCTTTT GTATGCAGGT
AGAGTTTCCT TATCTGTGGG TATTTTTGCT ACTTTACTGC GGATTTTGAT CGGTGTAACT
TTGGGAGGTA TCGCAGGTTA CTACGGAGGA GCAGTTGATA ATGTTATCAT GCGGATAGCC
GACGTCTTTA TGTCCTTTCC ATTTTTACCA ATTGCCTTAA CTTTCGTCGC CATACTGGGA
CCAAGTATTT ACAATATCAT GCTGGTAATA GCAATTATTG GTTGGCCGGG TATCTGCAGG
ATTGTAAGAG CGGAAATTCT ATCCTTGAGA GAACAAGAAT TTATTGAAGC TGCTAAAGCT
CTAGGTCTTA GTGACCGTAC CCAAATAATA AAACACTTGA TTCCCAATAC TATGGCTCCA
ATTATCGTTT CGGCTACTTT AGGTATAGCG GGTGCGATAT TAACTGAATC ATTTCTCAGC
TATTTGGGAT TAGGGGTAAG TCCACCAACT CCCACCTGGG GCAATTTGCT ATCTGCTGCC
CAAGAATCCT ATATTATTCG AAATAGATGG TGGCAGTGGG TACCACCGGG TATTATGATT
TTCTTGGCTG TTATGAGTCT AAACTTACTG GGAGATGGGC TGAGAGATGC TCTTGATCCT
AAACTTAAAG AGTAG
 
Protein sequence
MAKNELNEST SQEVQSHGLS EEVESPIKLI WRRFKRNRLA LIGLIVLLIL VFGAVFAPFL 
TPHDRDTIDY ANADAEPDSE HILGTDDRGR DMFTRLLYAG RVSLSVGIFA TLLRILIGVT
LGGIAGYYGG AVDNVIMRIA DVFMSFPFLP IALTFVAILG PSIYNIMLVI AIIGWPGICR
IVRAEILSLR EQEFIEAAKA LGLSDRTQII KHLIPNTMAP IIVSATLGIA GAILTESFLS
YLGLGVSPPT PTWGNLLSAA QESYIIRNRW WQWVPPGIMI FLAVMSLNLL GDGLRDALDP
KLKE