| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0462 |
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| Symbol | |
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| ID | 6315340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 488294 |
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| End bp | 490285 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642642846 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001916646 |
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| Protein GI | 188585101 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAAAG ATATTCAAAA GAAAGTTGAA GCTCTGAGAG AAAAAATTGA ATATCACAAT
CATCGTTATT ACGTTTTGGA CGCCCCTGAG ATATCTGATC AAGAATTTGA TGCTTTAATG
AATGAATTAA TAGAGCTTGA GCAAACTTAT CCGGAATATC AAAGCCCTGA TTCTCCTTCA
CAAAGAGTAG GTGGAGAACC CTTGGATAAA TTCCCTCGGG TAAGTCACGA AATACCCATG
TTGAGCTTGG AAAATGCCGA GAGCCAAAAA GGATTACTAG ATTTCCACCA AAGAGTTAGC
AAAAATACCC AAAAAACAGA CCCGGTATAT GTGGCAGAAT TAAAAATTGA TGGTTTGGCT
CTTTCGTTAA GATATGAACA GGGGATTTTA GTAAGAGGAG CAACCAGGGG CGATGGGACA
ACTGGCGAAG ATATTACTCC TAATGTCAAA ACAGTGAGAT CCATACCTTT AAAGTTATCT
AAACCCCTAG ATATTGAAAT CAGGGGTGAG GCTTTTATGT CTAAAGCTTC TTTTGAGCGT
TTGAATCAGG AAAAGGCAGA ACGAGGCGAA GATCCATTTG CCAATCCCCG AAATGCTGCA
GCCGGTTCTT TAAGACAACT AGATCCTAAA ATACCGGCCA AAAGAGACTT AGACTTTTTC
CCCTACAGTG TTCCATATAT AAGGGGTGAA AATTTAGATA GTCATTATTC TGCGGTAAAA
GAATTGAAGG ATCTCGGTTT TAAAATAAAT CCTTACATCA GGAAATTTGA AACCATGGAA
GAAGTTATCT CTTATTGTGA AGAATGGCAG GAAAAGCGGA CAAAACTTCC CTATGAAATT
GATGGAGTTG TTATTAAATT AAACGATTAT AACTTACAAC AACAATTGGG TGCCACTTCT
AAAAACCCCA GATGGGCCAT AGCTTATAAA TTTCCTGCTG AACAAGCTGA GAGTCAAGTG
AATAATATTT TTATTAATGT AGGTAGAACT GGAGCCTTAA CCCCTGTAGT GGAACTTGAA
CCTGTAAGGA TTGCGGGTTC TACAGTCAAA CGAGCTAGCT TGCATAATGA AGATATCCTC
AGACAAAAAG ATGTCAGGAT AGGTGATCGG GTCATCATTC AAAAAGCCGG AGATATAATT
CCAGAAGTGG TAAAAGTTAA AGAGGAAGCG CGAACTGGTC ACGAACAACC ATTTGTCTAT
CCTGAGTCTT GTCCAGTTTG CAAAAGTGAA GCCAAAAGAA TCAATGATGA AGCTATACTT
AGGTGCATAA ATCCTGGCTG TCCTGCCCAA GCAAAAGAAA GAATAATACA TTTTTCATCT
AGAGATGCTA TGGATATTGA AGGATTAGGA GAAAAAGTTG TAGAAAAATT ATATTCTCAC
GGTTTAATAA AGGACGTGGC GGATATTTAC TATTTGGCTA AAAATGAATT ATCGAACTTG
GAAGGTTTCG GGGACAAGTC TGCAGAAAAC TTGTTGCAAG CTATAGAGGA AAGTAAAAAA
AATCCATTTA ACAAGTTATT ATACGGCCTG GGGATAAGGT TAGTAGGTAA AAGAGCAGCC
CAATTACTGG CATTTGAATT TGAGCATCTG GACAATTTGA TGAAAGCACA AATAGAGGAT
CTGACTAAAA TAAATGATAT TGGACCTAGG ATGGCTACCA GTATAGTAAG CTTTTTTCAA
TTAGAACATA CTCACAATTT AATCAGAAAA CTTAAAAAAG CTGGAGTCAA TATGAAAGAA
CCCACGGAAC AAAACAAGAG TAGTGATCCA TCTCTAACTG GTAAGTTAGT AGTGATTACG
GGGACTTTTG ATAATTACAC CAGAAGGGAA TTGACTGATT TGATTGAAGC AAAAGGTGCT
AAAGTGACCA GTAATGTCAG TAGTAATACA GATTTTGTAT TAGTGGGAGC AAACCCCGGT
TCAAAGCGTG ACAAAGCGCA AGACCTGGGA TTAACAATTA TAGAAGAAAG TGATTTAGAA
GATTTTTTGT AA
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| Protein sequence | MSKDIQKKVE ALREKIEYHN HRYYVLDAPE ISDQEFDALM NELIELEQTY PEYQSPDSPS
QRVGGEPLDK FPRVSHEIPM LSLENAESQK GLLDFHQRVS KNTQKTDPVY VAELKIDGLA
LSLRYEQGIL VRGATRGDGT TGEDITPNVK TVRSIPLKLS KPLDIEIRGE AFMSKASFER
LNQEKAERGE DPFANPRNAA AGSLRQLDPK IPAKRDLDFF PYSVPYIRGE NLDSHYSAVK
ELKDLGFKIN PYIRKFETME EVISYCEEWQ EKRTKLPYEI DGVVIKLNDY NLQQQLGATS
KNPRWAIAYK FPAEQAESQV NNIFINVGRT GALTPVVELE PVRIAGSTVK RASLHNEDIL
RQKDVRIGDR VIIQKAGDII PEVVKVKEEA RTGHEQPFVY PESCPVCKSE AKRINDEAIL
RCINPGCPAQ AKERIIHFSS RDAMDIEGLG EKVVEKLYSH GLIKDVADIY YLAKNELSNL
EGFGDKSAEN LLQAIEESKK NPFNKLLYGL GIRLVGKRAA QLLAFEFEHL DNLMKAQIED
LTKINDIGPR MATSIVSFFQ LEHTHNLIRK LKKAGVNMKE PTEQNKSSDP SLTGKLVVIT
GTFDNYTRRE LTDLIEAKGA KVTSNVSSNT DFVLVGANPG SKRDKAQDLG LTIIEESDLE
DFL
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