| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0461 |
|---|
| Symbol | |
|---|
| ID | 6315339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 486103 |
|---|
| End bp | 488283 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642642845 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001916645 |
|---|
| Protein GI | 188585100 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 91 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTAT CATCACAATT AGCAGAATTA AATCAAGAGC AAACAGCTGC TGTCACCGCC
GGTGATGGCC CTGTTTTAGT ACTTGCAGGA GCGGGTAGTG GAAAAACAAA AGTTTTAACA
TATAGAATTG CTTATTTATT AGAAACAAAG GGCATTCACC CTGAACAAAT TTTAGCCCTT
ACATTTACTA ATAAAGCTGC TGGTGAAATG AAAGAGCGAG TGCAGACTAT CGTAGAAGGT
GATGCACCTT CTTGGGTATC GACCTTTCAT GCAGCTTGTG TTAGGATATT GCGACGTGAA
ATTGATCTAC TGGGTTATGG AAAGGATTTT TTGATCTACG ATACTAGGGA TAAGACCAAA
ATAGTCAAGG ATTTGTTAGC TGACTTTAAT TTGGATAAAA AGAAATATCC TCATCAGGCT
GTAGCTAAAA AGATAAGTGG TGTAAAAAAT AATCTACAGG ATCCTAGAGA ATTATTTTAT
CCCTATGATG AGGTTTTTGA AGCGTATCAG AAACGATTAA AAAAAGAGAA TGCCTTAGAT
TTTGATGATT TACTTCTATT GACATTAAGA TTGTTTGAAC AATACCCTGA TCGATTACAA
TACTATCAAA ATAAATTCCA ATATATTTTG GTTGACGAAT TTCAAGATAC TAACCCTGCT
CAGAATAGGT TGATTTCTTT ATTATCGCCA CCTCAGGATA ATGTTTTTGT CGTGGGCGAT
GATGATCAGT CAATATATTT GTTCAGAGGG GCCGATGTTA AAAATATCTT GGAATTTGAA
AAAACTTATC CCAATGCTCA GGTTTACAAA TTGGAAAAGA ATTATCGGTC AAGCAAGACT
ATTTTGGAAG CGGCCAATCA AGTAGTTACA AATAATCCTA GTCGTAAATC CAAAGAATTG
TGGACTGACA ATGATGAGGG TTATCCTTTG CAGTATTACG AAGCTGATGA CGAAAGAGAT
GAAGCATACT TTATCGCTGA AGAAATCCGT GCCAATAGAT ATCAACTGCC TCTAATAGCA
GTACTTTACA GAACCAATGC CCAGTCCAGG GTATTGGAAG ATATTTTTAG AAAAATGGGG
ATCTCTTATG AAGTTGTAGG AGGGACTGGA TTTTACGACC GTAAAGAGGT AAAAGATATA
ATGGCTTATT TAATGGTTGT TCAGTGTCCA CAATCTGATA GCCAACTAGA GAGAATTATT
AACGAGCCAA AAAGAGGAAT TGGAAAGACC AGCGTAGATA AATTGAAGGA CTATGCTAAT
AGAAACAATA TTACTTTATT TGATGCCCTT TTAGAAGTAG ACTATACCGA TATTAGTAAA
CGAGGAAAAA ATTCTGTTAA AAAGTTTACT GATATGATTG GTAATTTTCG AAAGATGAGG
GAATACTTGA CTGTAAGGGA ACTAATCGAA GAAGTTGCTG AAAAATCCGG TTATCTGGAA
GCACTTAGAT CTCAAAATAC CAAAGAAGCT GAAACTCGAA TGGAAAACGT GAGAGAAATT
TATTCTATGG CCAAAGAATT TGAAGCAGAA GGAGGGGAAA CCCTTCAGGA ATTTTTGACC
CACAGTACTT TAATGGGTGA TATAGATACA TGGGAAGATG AGGAACAAGC ACAAGTTGTG
ATGATGACTC TTCACAGTGC CAAGGGACTT GAGTTTCCAG GGGTATTTTT GACAGGTTTA
GAGGAAGGAG TTTTTCCTCA TATTCGTACC TATGACAGTG AAGCGTCTAT GGAAGAAGAG
CGTCGCCTTT GCTATGTAGG AATTACCAGA GCTGAACAGG TGTTGTACTT AACCTGGGCT
AGAGAGAGAA CCCTTAACGG TATGACAAGA ATGTTACAAC CATCCAGATT TGTTTCGGAA
ATAGGAGAGG ACTTAAAGGA TACTCAACAT CAGACACTAT CGGGACAAGG ACAAGTAACT
AGCACTCAAA ATTCCCATGA GCCACCACAA ACTCAAATTT CTTCTTTTTC AGATAAAACT
AGTCCTTCCG GGAAGAGAAA TGTTAACTTA GCGGAAGAAA GTTATCAGGA AGGAGACTTG
ATTTCCCACA AAAAATGGGG AGAAGGAAAG GTGTTGCAAG CCCAGCAAGC TGGTAGTGAT
TGGGTTTTGA CAGTTTCCTT TGACGGTGCC GGCATTAAAA AACTCGCTGC TAGTGTAGCA
CCTATTAAGA AACTGAAATG A
|
|---|
| Protein sequence | MVVSSQLAEL NQEQTAAVTA GDGPVLVLAG AGSGKTKVLT YRIAYLLETK GIHPEQILAL
TFTNKAAGEM KERVQTIVEG DAPSWVSTFH AACVRILRRE IDLLGYGKDF LIYDTRDKTK
IVKDLLADFN LDKKKYPHQA VAKKISGVKN NLQDPRELFY PYDEVFEAYQ KRLKKENALD
FDDLLLLTLR LFEQYPDRLQ YYQNKFQYIL VDEFQDTNPA QNRLISLLSP PQDNVFVVGD
DDQSIYLFRG ADVKNILEFE KTYPNAQVYK LEKNYRSSKT ILEAANQVVT NNPSRKSKEL
WTDNDEGYPL QYYEADDERD EAYFIAEEIR ANRYQLPLIA VLYRTNAQSR VLEDIFRKMG
ISYEVVGGTG FYDRKEVKDI MAYLMVVQCP QSDSQLERII NEPKRGIGKT SVDKLKDYAN
RNNITLFDAL LEVDYTDISK RGKNSVKKFT DMIGNFRKMR EYLTVRELIE EVAEKSGYLE
ALRSQNTKEA ETRMENVREI YSMAKEFEAE GGETLQEFLT HSTLMGDIDT WEDEEQAQVV
MMTLHSAKGL EFPGVFLTGL EEGVFPHIRT YDSEASMEEE RRLCYVGITR AEQVLYLTWA
RERTLNGMTR MLQPSRFVSE IGEDLKDTQH QTLSGQGQVT STQNSHEPPQ TQISSFSDKT
SPSGKRNVNL AEESYQEGDL ISHKKWGEGK VLQAQQAGSD WVLTVSFDGA GIKKLAASVA
PIKKLK
|
|---|
| |