Gene Nther_0451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0451 
Symbol 
ID6315276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp475495 
End bp476250 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content37% 
IMG OID642642835 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_001916635 
Protein GI188585090 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000076324 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTT TCATGAAACC GAAGAAAAAG GCTTTGAAAA ACATTGCTTT TGTTGCGGCG 
GGATTATTTA TTGCTTCGGT AGTGTTAGGA GCTGGCGCAG GAGCTCTCGG ATTTTTAGAT
GGGGGTCAAC AAGCTGATTT AAGTGCTATG GAAGAGCAAG TTGACCATTT AAGAGCTGAA
GTAGAAGCTG ACCCAGAAAA TGTCACAGCT TTGAGAAACC TAGGTAATGC TAAGATGCAA
GTAGCTATTC AAATGGAACA AGAAGGTGAA GAAGGAGCTA TCGAATACTA CGAAAAAGCC
TTGGAGAACT TCGAATCAGC CGTTGAACTT GATGAAGATA ATCCAGAATT ATTAGTGGAC
AAAGCAACTG CTGCGTATAC TACTCAAAAT ACTGAAAAAG CGGAAGAATC TATTGAAAAA
GCTCTTGAAT TAGATCCTGA AAATGTAAAT GCCTTACACA TCTCTGCCTT TATGATGTTA
AATGAAGGGG AATATGATGA GGCAATAGAT AAATGGGATA AAATTTTAGA TAAGGACCAA
TTGGCTGAAC AAGAACGGGA GCAATTTGAG ACATTGATAG CTCAGGCAGA ACAACTGAAG
GAAATTGAAG AGATGGATCC AAAAGAGGAC TTGGATAAGG AAGAATGGGA AGAAGAATTT
GAGGAAGAAT ATCTAGATGA AAAAGATAAT GAAAAAGAAG TAAAAAAAGA AGATGAAGAT
GTAGATGAAA ACAATGATGA AAAAGAGGAT AATTAA
 
Protein sequence
MSFFMKPKKK ALKNIAFVAA GLFIASVVLG AGAGALGFLD GGQQADLSAM EEQVDHLRAE 
VEADPENVTA LRNLGNAKMQ VAIQMEQEGE EGAIEYYEKA LENFESAVEL DEDNPELLVD
KATAAYTTQN TEKAEESIEK ALELDPENVN ALHISAFMML NEGEYDEAID KWDKILDKDQ
LAEQEREQFE TLIAQAEQLK EIEEMDPKED LDKEEWEEEF EEEYLDEKDN EKEVKKEDED
VDENNDEKED N