Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0450 |
Symbol | |
ID | 6315275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 473698 |
End bp | 475344 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642642834 |
Product | chaperonin GroEL |
Protein accession | YP_001916634 |
Protein GI | 188585089 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000441199 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAGG ACATTAAATT TAGAGAAGAT GCTCGTGCCA GATTAGAGCA AGGTGTAAAT AAGTTAGCTG ACACCTTAAA AGTAACTTTG GGACCTAAAG GTCGCAATGT TGTTCTTGAT AAAAAGTTTG GCTCACCTCA AATAACAAAT GACGGTGTAA CTATTGCTAG AGATATTGAT TTAGAAGATA ATTATGAAAA TATGGGAGCT CAGTTGGTTA AAGAGGTTGC AACTCAAACC AATGACGTAG CTGGAGACGG TACAACTACT GCAACTATTC TAGCACAGGC TATGGTTAAT GAAGGAATTA AGAACGTAAC TGCTGGTGCC AACCCCATGA TAATCAGAAA AGGAATCCAA AAAGCTGTCG ATAGAGCAGT TGAAGAGTTG CAGAAAAACG CTGTCAGTGT TGAAGATAAA GAGTCCATTT CTCAAGTTGC TTCAATCTCA GCTAATGACG AAGAAGTAGG TAAGCTAATT GCTGAAGCTA TGGAAAAAGT AGGCAAAGAT GGAGTAATCA CAGTAGAAGA ATCCAAGAGC TTCAAAACTG ATTTAAACGT AGTTGAAGGT ATGCAGTTTG ATAGAGGATA TGTTTCACCT TATATGGTAA CTGATAATGA AAAGATGGAA GCTCACTTAG AAGAGCCATA CATCTTGATT ACCGATAAGA AGATCGGTAA TATCCAAGAG ATTTTACCAG TACTAGAAAA AATCGTTGAA CAAGGTAAAG AAGTTCTGTT AATCGCAGAA GACATCGAAG GCGAAGCCTT GGCTACATTA GTTGTTAACA AGTTGAGAGG AACCTTCACT TGTGTGGGAG TTAAAGCTCC TGGTTTTGGT GACAGAAGAA AAGCTATGCT TGAAGATATT GCCGTACTTA CAGGTGGTCA GGTAATCAGT GAAGATGTAG GACTTGAACT TAAGAATGCT GATATCAGCA TGTTAGGTCG AGCTAGACAG GTCACCATCA CTAAAGACGA TACAACTATC GTAGATGGCT ATGGAAATGA AGAAGATATC CAAAAACGAA TTACTCAATT AAGAACTCAA ATTGAAGAAA CTACCTCAGA TTTCGATAGA GAAAAACTAG AAGAGCGCTT AGCTAAACTA GCTGGAGGAG TTGCAGTAGT TGAAGTTGGA GCAGCTACTG AAACTGAAAT GAAAGAAAAG AAACTACGAA TTGAAGACGC ACTTAACTCT ACTAGAGCTG CTGTGGAAGA AGGAATCGTA GCTGGTGGTG GAACAGCCCT AATTGATGTA TTACCTTCCC TTGAAGAAGT TCAAGCGGAT GGTGACGAGT CTACAGGAGT TAGCATCGTT AGACGTGCTC TAGAAGAACC TGTACGTCAA TTGGCACATA ACTCTGGTGC TGAGGGCTCC ATAGTTGCTG AACAAGTTAA GCAAAAAGGA ACAAACATAG GATTTAATGC CCTTGAAAAC GATTACACTA ATATGCTCGA TGCTGGTGTA GTTGATCCTA AGAAAGTTAC TAGAAGCGCC CTTGAAAATG CAGGAAGTAT CGCTGCAATG TTCTTAACAA CTGAAGCAGT AGTAGCAGAT CTACCAGATG AGGACGATAA CGATGATGGA GACATGGGCG GTGGCGCCCC AGGAATGGGA GGCATGGGCG GAATGCCCGG AATGTAA
|
Protein sequence | MAKDIKFRED ARARLEQGVN KLADTLKVTL GPKGRNVVLD KKFGSPQITN DGVTIARDID LEDNYENMGA QLVKEVATQT NDVAGDGTTT ATILAQAMVN EGIKNVTAGA NPMIIRKGIQ KAVDRAVEEL QKNAVSVEDK ESISQVASIS ANDEEVGKLI AEAMEKVGKD GVITVEESKS FKTDLNVVEG MQFDRGYVSP YMVTDNEKME AHLEEPYILI TDKKIGNIQE ILPVLEKIVE QGKEVLLIAE DIEGEALATL VVNKLRGTFT CVGVKAPGFG DRRKAMLEDI AVLTGGQVIS EDVGLELKNA DISMLGRARQ VTITKDDTTI VDGYGNEEDI QKRITQLRTQ IEETTSDFDR EKLEERLAKL AGGVAVVEVG AATETEMKEK KLRIEDALNS TRAAVEEGIV AGGGTALIDV LPSLEEVQAD GDESTGVSIV RRALEEPVRQ LAHNSGAEGS IVAEQVKQKG TNIGFNALEN DYTNMLDAGV VDPKKVTRSA LENAGSIAAM FLTTEAVVAD LPDEDDNDDG DMGGGAPGMG GMGGMPGM
|
| |