| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0434 |
|---|
| Symbol | |
|---|
| ID | 6314421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 454634 |
|---|
| End bp | 455782 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642642818 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_001916618 |
|---|
| Protein GI | 188585073 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA AAACTTTTCA AACCAAGTCA TTTTCAAACT TATTAACAGT AATTTTCTGC
TTAAGTATGA TTACAGTACT GGCAATTCCT TTGATAGGAT GTCAGGATGA AGAAACAAAA
TCTCCAAAGG AGTCACAAGA AGAAACAACA GAAAAAGATG AAAAATCTGA ATCTGAAGAT
AATAAAGAAA AAGATGAATC ACAAACAGAT GAAAACGAGG AGAACCCTGA AGAAACCATA
GACTTTCAAG AGGTTCAACC CAATGAACTG GGAGATGTGA TGATTTTAAT GTATCATCAA
ATTGGTGATG AAGAAGACAC CTGGCAAAGA ACTCGCGAAA ATTTCAGAGA AGACCTGGAA
CGTTTATACG AAAAAGATTA TCGACTGGTA AACTTAATGG ATGTTGTTAA CGGAAATATT
GATCTGCCAC CGGGAAAAAC TCCGGTAGTA TTAACATTTG ACGATGCTTC AAAGGGACAA
TTTGGTTATA TTGAGGAGGA TGGTGAAAAA ACCATCGACC CTGATACAGC TGTTGGAATT
ATCCTAGAAA TGAAAGAAAA ATACGATGAT TTTACTATAG GAGGTACCTT TTACGTCAAT
TATATACCTG TCCCTTTCAG GGACAAGGAA TTATACGAAG AAAAAATAGC TCATCTGGAT
GAGCTAGGAT TTGAAATCGG AAACCATGGA TATAATCATC TAAATCTTAA AGATTTAGAT
GCCCAGGAAA TTCAAGAAGA ATTGGGACGA CCCCATAAAA TTACCGAAAA TATTATACCT
GAATACCAGT TAGAAAGTTT AGCCTTGGCC TTCGGAGCTT GGCCTGGTCA AGATGATCTA
AAAGAATTTG TATACTCAGG TGAATACGAA GATATTGAAT ACGAACATAA TGCGGTTTTA
AATGTCGGGG CAGAGCCAGC TAACTCCCCT TTCCATAAGG ATTTTGATCC CCTGGATTTA
CCCAGGGTCA GGGCAGATCA AAAGCGCATG GACCAATGGT TATCATACTA TGAAAACAAC
CCGGAAAAAA GATATGTGAG TGATGGCAAT CCCGATACTA TTACTATTCC TCAAGAACTG
AAAGAAGAGT TAAATACGGA TTTTAAAGAT CACAAAGAAC TAGAGATCCA AACTTATACT
GTAGACTGA
|
|---|
| Protein sequence | MTKKTFQTKS FSNLLTVIFC LSMITVLAIP LIGCQDEETK SPKESQEETT EKDEKSESED
NKEKDESQTD ENEENPEETI DFQEVQPNEL GDVMILMYHQ IGDEEDTWQR TRENFREDLE
RLYEKDYRLV NLMDVVNGNI DLPPGKTPVV LTFDDASKGQ FGYIEEDGEK TIDPDTAVGI
ILEMKEKYDD FTIGGTFYVN YIPVPFRDKE LYEEKIAHLD ELGFEIGNHG YNHLNLKDLD
AQEIQEELGR PHKITENIIP EYQLESLALA FGAWPGQDDL KEFVYSGEYE DIEYEHNAVL
NVGAEPANSP FHKDFDPLDL PRVRADQKRM DQWLSYYENN PEKRYVSDGN PDTITIPQEL
KEELNTDFKD HKELEIQTYT VD
|
|---|
| |