Gene Nther_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0422 
Symbol 
ID6317116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp441122 
End bp442297 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content40% 
IMG OID642642806 
Productinner-membrane translocator 
Protein accessionYP_001916606 
Protein GI188585061 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.975365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC CGAAAAATAA AATTAACGAA AGTGTTAATA ATGCTATGGA AAAAGTTAGA 
GGCGCTGTCA TGTCTAGTCA GAATGTCCGT TCTACCGCAT CTGAACTAAT TATGTCCCTG
GCATCGATAT TGGTTGCTTT ATTAGTAGGA GTTATATTTA TTTTAATTGC GGAACAATCA
CCAATAGATG CTTACTATGC CTTATTTGAC GGAGCCTTTG GTTCATTTAC GAATTTCATG
GGAACTTTAC ACCGATCTAC GCCATTAATT TTAACAGGAC TGGCTGTAGC TTTTTCTTTT
AGGACAGGCC TATTCAATAT AGGTGCCGAA GGGCAGCTAT TAATGGGTGG ATTTATTGCT
GGTTTAGTCG GATTTTACTT TGAAGGTCTT CCCACAATAA TACATTTGCC ACTGACGGTC
TTAGCTGGAA TGTTGGCAGG GGGTATTTGG GCAGGTATAC CCGGTATATT AAAAGCTAAA
CTAGGGGTTC ATGAAGTTAT AAATACCATT ATGCTAAACC ACATTGCCAT TCACATTACT
ATTTACTATG GTATAAACCG TTTTAGAGAA GGAGGCCGTC AGGCTACTCC TTATGTTCAG
GAAACCGCTG AACTATTCCA ATTTAATCAA ATGCCTGAAC ACCCTATTTT ACAGCATTTA
CCATTTGTTA ATTTCTTTGA CCATACTAGT ATAAATTTAC ACAGTGGCTT TTTAATTGCT
TTAATTGTTG CTGTAATAGT CTGGTATATA CTCTGGAAAA CCACATTGGG TTATGAGATC
AGGGCAGTTG GATTAAACTC CCCTGCTGCC GAATACGGTG GTATAAACGT GTCTCAGAAA
ATTGTAGTTG CCATGTTAAT CAGTGGTGGC ATTGCAGGCT TGGCAGGAAT AAGTGAAACC
CTTGGGACCC ATCAAAGTTT TGTGGAGGGT ATGGATGCCG GCCATGGTTT TACGGGAATT
GCCGTGGCAT TATTAGGTAG AAACCATCCT GTAGGTGTTA TCCTAGGGGG ATTACTATTT
GGTGCTCTTT CTCAGGGAGG ACTGCAAATG CAGTTTGCAG GTGTTCCAAG GGAAATTGTA
ATAATTATTC AGGCTCTAGT GATATTCTTT GTAGCAAGTT TCCAGATGTT TAAGATATTC
ATTGCCAGAA GAAAAGCTAA AGGGGAGGCT AAATAA
 
Protein sequence
MTQPKNKINE SVNNAMEKVR GAVMSSQNVR STASELIMSL ASILVALLVG VIFILIAEQS 
PIDAYYALFD GAFGSFTNFM GTLHRSTPLI LTGLAVAFSF RTGLFNIGAE GQLLMGGFIA
GLVGFYFEGL PTIIHLPLTV LAGMLAGGIW AGIPGILKAK LGVHEVINTI MLNHIAIHIT
IYYGINRFRE GGRQATPYVQ ETAELFQFNQ MPEHPILQHL PFVNFFDHTS INLHSGFLIA
LIVAVIVWYI LWKTTLGYEI RAVGLNSPAA EYGGINVSQK IVVAMLISGG IAGLAGISET
LGTHQSFVEG MDAGHGFTGI AVALLGRNHP VGVILGGLLF GALSQGGLQM QFAGVPREIV
IIIQALVIFF VASFQMFKIF IARRKAKGEA K