Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0422 |
Symbol | |
ID | 6317116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 441122 |
End bp | 442297 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642642806 |
Product | inner-membrane translocator |
Protein accession | YP_001916606 |
Protein GI | 188585061 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.975365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC CGAAAAATAA AATTAACGAA AGTGTTAATA ATGCTATGGA AAAAGTTAGA GGCGCTGTCA TGTCTAGTCA GAATGTCCGT TCTACCGCAT CTGAACTAAT TATGTCCCTG GCATCGATAT TGGTTGCTTT ATTAGTAGGA GTTATATTTA TTTTAATTGC GGAACAATCA CCAATAGATG CTTACTATGC CTTATTTGAC GGAGCCTTTG GTTCATTTAC GAATTTCATG GGAACTTTAC ACCGATCTAC GCCATTAATT TTAACAGGAC TGGCTGTAGC TTTTTCTTTT AGGACAGGCC TATTCAATAT AGGTGCCGAA GGGCAGCTAT TAATGGGTGG ATTTATTGCT GGTTTAGTCG GATTTTACTT TGAAGGTCTT CCCACAATAA TACATTTGCC ACTGACGGTC TTAGCTGGAA TGTTGGCAGG GGGTATTTGG GCAGGTATAC CCGGTATATT AAAAGCTAAA CTAGGGGTTC ATGAAGTTAT AAATACCATT ATGCTAAACC ACATTGCCAT TCACATTACT ATTTACTATG GTATAAACCG TTTTAGAGAA GGAGGCCGTC AGGCTACTCC TTATGTTCAG GAAACCGCTG AACTATTCCA ATTTAATCAA ATGCCTGAAC ACCCTATTTT ACAGCATTTA CCATTTGTTA ATTTCTTTGA CCATACTAGT ATAAATTTAC ACAGTGGCTT TTTAATTGCT TTAATTGTTG CTGTAATAGT CTGGTATATA CTCTGGAAAA CCACATTGGG TTATGAGATC AGGGCAGTTG GATTAAACTC CCCTGCTGCC GAATACGGTG GTATAAACGT GTCTCAGAAA ATTGTAGTTG CCATGTTAAT CAGTGGTGGC ATTGCAGGCT TGGCAGGAAT AAGTGAAACC CTTGGGACCC ATCAAAGTTT TGTGGAGGGT ATGGATGCCG GCCATGGTTT TACGGGAATT GCCGTGGCAT TATTAGGTAG AAACCATCCT GTAGGTGTTA TCCTAGGGGG ATTACTATTT GGTGCTCTTT CTCAGGGAGG ACTGCAAATG CAGTTTGCAG GTGTTCCAAG GGAAATTGTA ATAATTATTC AGGCTCTAGT GATATTCTTT GTAGCAAGTT TCCAGATGTT TAAGATATTC ATTGCCAGAA GAAAAGCTAA AGGGGAGGCT AAATAA
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Protein sequence | MTQPKNKINE SVNNAMEKVR GAVMSSQNVR STASELIMSL ASILVALLVG VIFILIAEQS PIDAYYALFD GAFGSFTNFM GTLHRSTPLI LTGLAVAFSF RTGLFNIGAE GQLLMGGFIA GLVGFYFEGL PTIIHLPLTV LAGMLAGGIW AGIPGILKAK LGVHEVINTI MLNHIAIHIT IYYGINRFRE GGRQATPYVQ ETAELFQFNQ MPEHPILQHL PFVNFFDHTS INLHSGFLIA LIVAVIVWYI LWKTTLGYEI RAVGLNSPAA EYGGINVSQK IVVAMLISGG IAGLAGISET LGTHQSFVEG MDAGHGFTGI AVALLGRNHP VGVILGGLLF GALSQGGLQM QFAGVPREIV IIIQALVIFF VASFQMFKIF IARRKAKGEA K
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