Gene Nther_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0421 
Symbol 
ID6317115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp439593 
End bp441125 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content37% 
IMG OID642642805 
ProductABC transporter related 
Protein accessionYP_001916605 
Protein GI188585060 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0207744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA ATATTTTAGA AATGCGCAAT ATCACAAAAG TTTTCCCTGG GGTTAAAGCC 
AACGATAATG TTAATTTGCA GGTTCGTAAG GGGGAAATCC ATGCCCTTGT AGGTGAGAAT
GGTGCAGGGA AGTCAACTTT AATGAACATC CTTTACGGCC TTTATGCTCC AGATGAAGGA
GATATTCTTT ATAATGGTGA AAAAGTGGAT CTTAATGATC CTATGAAAGC AATTGAACTG
GGTATCGGAA TGGTACATCA GCACTTTAAA CTTGTAGACC CCTTAACTGT AGTGGAGAAC
ATTATCCTTG GGAGTGAACC CAGGAAAAAT ACACTGTTTA TTGACAAAAA GTCAGCCACG
AAAGAAGTGC AAGAAATTTC CGACAAATAC GGGTTAAGAG TTGATCCTAA TTCTAGGATA
GAAAATGTTT CAGTTGGTAT GCAGCAGAGA GTAGAAATAG TTAAAATTTT GTATAGGGGC
GCTGAATTAT TAATTTTTGA TGAACCTACT GCTGTACTCA CTCCACAAGA AATCGAAGAA
CTTTTTGAGA TTTTTCGGTC ATTGAAAGAA CAGGGGAAAA CCATCATATT TATTACTCAC
AAATTAGGAG AAGTTAAAGA AATCTCAGAT AGATTAACTG TTTTGCGAAA TGGTCAATCA
GTGGGTACTG TTGAAACTTC AACAGTATCA AAGGAAGAAG TAGCCAAAAT GATGGTTGGA
AGAGAAGTTT TATTACGAGT TGATAAAGAC GTGGCCAAAC CGAAGGATGT TGTTTTAAAG
GTAGATGGAT TATCAGCCAA AGACAGTCGT GGAGTGCCCA TTGTAAAGGA TATCTCCTTG
GATGTGAGAG GAGGAGAAAT TCTAGGAATA GCTGGTGTTG AAGGAAATGG ACAAACAGAA
CTGATTGAGG TTTTAACTGG CCTTAGACAA GCTACAAATG GTAATATTTT TTTCAGTGGA
CAAGATATAA CTGGTTTGAC TCCTCGTCAA ATAAAAGAAC ACAAAATAGG CCATATTCCT
GAAGACCGGC AAAAAAGAGG TTTAGTTCTG GATTTTGACT TAGCAGAAAA TATGATTTTA
GGTTATCATT ATCAAAAACC TTTTGCTTCT AATTATAGAA TGAACTACAA TCATATAATT
GACTATACAA AAGAATTAAT TTCAGAATAT GATGTTCGCA CCCCAGGCTA TCATGTCCAA
GCCAGGTCCC TTTCTGGTGG TAATCAGCAA AAAGTGATAA TTGCACGAGA GTTTTCACAA
GAACCTGAAC TATTAATTGC GTCACAGCCA ACCAGGGGTG TTGACATAGG AGCCATTGAG
TTCATTCATC AAAACTTAAT AGAGCAGAGG GATCAAGGAA AAGCAATTTT AGTTGTTTCG
GCAGATTTAA ATGAAATTAT GTCTCTCAGT GACAGAATAG CTGTCATCTA TGATGGTAGT
ATTGTAGATG TAGTTAATTC AGAAGAAGTT GATGAATATC AGTTAGGAGC ATTGATGACG
GGGTCTAATT TAGAGAAGGA GGCTTCTAAA TGA
 
Protein sequence
MAENILEMRN ITKVFPGVKA NDNVNLQVRK GEIHALVGEN GAGKSTLMNI LYGLYAPDEG 
DILYNGEKVD LNDPMKAIEL GIGMVHQHFK LVDPLTVVEN IILGSEPRKN TLFIDKKSAT
KEVQEISDKY GLRVDPNSRI ENVSVGMQQR VEIVKILYRG AELLIFDEPT AVLTPQEIEE
LFEIFRSLKE QGKTIIFITH KLGEVKEISD RLTVLRNGQS VGTVETSTVS KEEVAKMMVG
REVLLRVDKD VAKPKDVVLK VDGLSAKDSR GVPIVKDISL DVRGGEILGI AGVEGNGQTE
LIEVLTGLRQ ATNGNIFFSG QDITGLTPRQ IKEHKIGHIP EDRQKRGLVL DFDLAENMIL
GYHYQKPFAS NYRMNYNHII DYTKELISEY DVRTPGYHVQ ARSLSGGNQQ KVIIAREFSQ
EPELLIASQP TRGVDIGAIE FIHQNLIEQR DQGKAILVVS ADLNEIMSLS DRIAVIYDGS
IVDVVNSEEV DEYQLGALMT GSNLEKEASK