Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0394 |
Symbol | |
ID | 6316227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 409837 |
End bp | 411462 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642642778 |
Product | Recombinase |
Protein accession | YP_001916578 |
Protein GI | 188585033 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.018734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACTA CAATAAAATA TGCAAAATAT ATGCGTTACT CAAGGGTAGA TGGTGATAGA GAGAAAGAAA GTATTCAAAA TCAGGATAAA ATAATTGAAA ACTATATCAA AGATCGTGAA ACTAAATATA ATGAGAAATG GTTGTTAGTA GGAGAATATG TGGACCTAGA TTATACTGGC TCAAACTTTA ATAGACCTGA ATTTTTAAAA ATGAAGGAAG AAGTTGAAAA TGATAAAATT GATGTAATAA TATCGAAAGA TGCGTCCAGG TTTGGAAGAA ACGTGGCAAC AGAGGTTTAT TTTGAAGAAA TATTTCCAAA ATACAGGACA CGATTTATTG GAGTGGTTGA TAATGTAGAT ACTGCTTCTG AAAACCAGGC TTTTGAAAGA AAGATAAGAG GATTAATGAA TGAGAACTAT TGTAGTGATA TTTCACAAAA GGTTAAAAGC TCGCTAAAAA CTAAAATGAT TGAGGGTAAA TTTATAGGGG CTTCTCCACC TTATGGATTT GAACGAGACC TTGATGATAA GCATAAGTTA ATTGTTGATG AAGAGGTCAG ACCTATAATA TTGAAAATAG TGGATTTATA TTTAAAAGGT TATGGGTTTT CAGCTATAGC TAAAATATTA AATGCTGAAA AAATACCATC ACCTTCTGCT TATAAAAAAA TGAAAAAATC AAACTATAAA AATCCAAGAG CTAATAGGAG GTTGTGGAGT CCTTCAACTA TTAGGAAAAT TTTAACAGAA CCTATTTATA ATGGCACACT CGTACAGGGA AAGCATCCAA AAATTAACTA TAAAATTAAT AGTAGAAAAA AAAGTGGAGA GTCTGAGTTA ATCAAAGTAG ATAATGCAGT TGAGAAAATT ATTGACGATG AAACATTTGA GTTAGTTGGG AAAAAAATTA ATAGTAGAAG TAAAAATGTT AAGAATAATG ACTCTCCGAG TGTTTTACCA GATAATGTGT ATTCAGGACT TGTATATTGT GAGGATTGTG GCTCAAAGAT GGTATATAGA AGTGATAGGG ATATGTATAT GTGCGGTACC TATGCTAAAT ATGGGAAGAA ATACTGCTCC AATCATAATA TCAAAACAAA AGTTATAAAT GAAGTGGTCA TAGAGCAATT AAATTTGATT ATTAAGCTTA CAATTGATAT TAGAACTCTT TTGAACGATA TAAAAAAGAA ATACCAAGAA GTAAGTGGTA AGGATGTTAT TGAAATTAAA AGAAAAAAGC GTGAAAATCG CCTAAAAACT TTAAAAGAAT CTTTAAAAAT TTTAAGGGAA GAGTATGCAG ATGGTATAAT TGACCAAGAG GAATATAAAG AGACTAGGTC TGAATATGTA AATGAAATTA ATACCATAGA AAATGAACTG GGGAAATTAC AAGTTTCATC AAGCAAAGAA TCTGTAATTA ATGATTGGGA GGAGAAAGTT AAGGACTTAG AAAAGTTTTA TAATAACTTT CTGAAAATTA ACAAAATAGA TAGAGAAATA GCTTTAAAAC TTATAGATAC CATAACTGTA GGAACCGACC AAATATCTGA AATCAAATTC GCTGGAGCTT CGCCATTTGA ATTAGCTCAA GAATTGAAAT CTGAAATATC AAGTGTGGCA CTATGA
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Protein sequence | MVTTIKYAKY MRYSRVDGDR EKESIQNQDK IIENYIKDRE TKYNEKWLLV GEYVDLDYTG SNFNRPEFLK MKEEVENDKI DVIISKDASR FGRNVATEVY FEEIFPKYRT RFIGVVDNVD TASENQAFER KIRGLMNENY CSDISQKVKS SLKTKMIEGK FIGASPPYGF ERDLDDKHKL IVDEEVRPII LKIVDLYLKG YGFSAIAKIL NAEKIPSPSA YKKMKKSNYK NPRANRRLWS PSTIRKILTE PIYNGTLVQG KHPKINYKIN SRKKSGESEL IKVDNAVEKI IDDETFELVG KKINSRSKNV KNNDSPSVLP DNVYSGLVYC EDCGSKMVYR SDRDMYMCGT YAKYGKKYCS NHNIKTKVIN EVVIEQLNLI IKLTIDIRTL LNDIKKKYQE VSGKDVIEIK RKKRENRLKT LKESLKILRE EYADGIIDQE EYKETRSEYV NEINTIENEL GKLQVSSSKE SVINDWEEKV KDLEKFYNNF LKINKIDREI ALKLIDTITV GTDQISEIKF AGASPFELAQ ELKSEISSVA L
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