Gene Nther_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0390 
Symbol 
ID6316223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp404504 
End bp406288 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content32% 
IMG OID642642774 
Producthypothetical protein 
Protein accessionYP_001916574 
Protein GI188585029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0209901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAA ACGTAAATCT TCAAAAGTTT TTTAAGCTGT TTCATGAAAA GGACATCATT 
TTTCAGCTAG TTTCGACAGG GGGCACTCAA AAACAAGATA ACCCCCAATT AAGACTAAAT
GACCTGTCAG AACTAAATCA GTTTGTAGAA AAGCTAGAAG CAAGAGCAGA TCAAGGTTAC
AAAGTTTATT TCATCACAAA TCCAGGTGGG ACTAAGAACG ATGATATCTT TGGAGTTAAT
GCACAGTTTA TCGACATTGA TTTTCATGAG TTTGAAGATG CAACTCAAAA AGAACAGAAG
AAAAATGAAA CAGTTAAGAT GTTGAAAGAA CTAAAGCTAA AACCTACAGC TATTGTAATG
ACCCCCAATG GAGTTCATGC TTACTGGCAT TTAAAAGAAG AAGAAAGTAA AAGACATAAG
GTGCTTGAAA GATTTATTGA TACCCAAAAG ATGATGGCTG AATACTTCGG GAGTTGTACA
GGGGTAACTA ATAGGCTGGG ACAAGCTATG AGAGTCCCTA GCCCTAAGTT TGGTGGAAAA
ATTGTAGAAA TCAATCCTGA TCAGCTCTAC ACCCAAGAAG AAATTCGTTC GTCGTTTTAC
GCTGAAACTG AAAAGCCAAA AGCAAGAAAT CAGCAAAATA CTGGACAAAT AGAACGAGTT
AACAACAAGA TCAAAATTTA TAATATATCA GACTTTTTTG AAGTAGCAAA ACAACAGGAT
ATAAGAAAGT ACTTAAAAAC CAATGTACTA CTGAATAAGA GTTTCAATTG TTTTTATCAT
CACGATAATA ATCCATCCGC TGTTATTTCT AAGAAGAATG GGAGATACCA ATATTTTTGC
AATTCTTCCA ATTGTAGAGC ATATAATGGT AGATCAGGAC TTACAATTAT TGATTTATTA
CAGTTAGACG GAATGACAAA ATGGCAAGAT ATAATTTCTC AAATAACTAA TACGTTTAAC
ATAGAACTGG TTTCTACGAA ATGGATGGAG GGACAGAAAA ATAAGTATAT AGCAAACTTG
ACTTTCTTAA AAGATGAACT TGAAGAAATG AAAAGTACTG ATATATTGAC AAGATATGGA
ATTATCATAC TTGAGAAACT TCTTAATATT GGACTTACTA AAATAACTCC AGAATTACAT
GATGAAAATG GAGAAGCTGT ATTTTTTACT TCTAATAGAT ACTTATCAAG GGAAAAAAAT
AAGCCTATAG AAAAAGTAAA TGCTTATCTT AACCTTTTTT GCATGTTGGG TCTACTTAAC
AAAGTGGATC CGCCTAAGAA CCATAAGGTC ACTCAAGAAT CTTTAAAACG AGCTAGAGAA
AATAACAGGA GAGTTATCAA TTTTTACAGT GTCCCAAATT ACTATGAGAT TAAAAACCAG
ATTGAAAACA GAGCTTTTGA TTTAAGGAAA CAAGGCTTCT CCATAAATAC TGTAAGTCAA
GTGTACGTGA AAAATTATGA TGAAGAACTT GCTAAAAAAG TTTACCATTC AAATGAAAAC
ATCAGTGAGT TTGGTATTAA AGTAAGAGAA AAAATATTAG AAAAAGCAGA GTCACAGATA
TACCATTATG GATATACTCA TGACAAACTA TTGGCAGGGC TTAAAGTATC AGGTAGAAGA
ATTAAAAAAG AACGACTGAA GCAAGAGTTT AAGAAAGTTA TCCCTATTCT TATTGATAAA
GGGTATATCT TAAAACCTGC TAATAATAAA TTGAAGAGCA AATTTAATAT AAAATCAAAG
GGTTATCCTA AAATATTATT AAAACCTGAA GATCATGAGC TGTAA
 
Protein sequence
MQQNVNLQKF FKLFHEKDII FQLVSTGGTQ KQDNPQLRLN DLSELNQFVE KLEARADQGY 
KVYFITNPGG TKNDDIFGVN AQFIDIDFHE FEDATQKEQK KNETVKMLKE LKLKPTAIVM
TPNGVHAYWH LKEEESKRHK VLERFIDTQK MMAEYFGSCT GVTNRLGQAM RVPSPKFGGK
IVEINPDQLY TQEEIRSSFY AETEKPKARN QQNTGQIERV NNKIKIYNIS DFFEVAKQQD
IRKYLKTNVL LNKSFNCFYH HDNNPSAVIS KKNGRYQYFC NSSNCRAYNG RSGLTIIDLL
QLDGMTKWQD IISQITNTFN IELVSTKWME GQKNKYIANL TFLKDELEEM KSTDILTRYG
IIILEKLLNI GLTKITPELH DENGEAVFFT SNRYLSREKN KPIEKVNAYL NLFCMLGLLN
KVDPPKNHKV TQESLKRARE NNRRVINFYS VPNYYEIKNQ IENRAFDLRK QGFSINTVSQ
VYVKNYDEEL AKKVYHSNEN ISEFGIKVRE KILEKAESQI YHYGYTHDKL LAGLKVSGRR
IKKERLKQEF KKVIPILIDK GYILKPANNK LKSKFNIKSK GYPKILLKPE DHEL