Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0382 |
Symbol | |
ID | 6316215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 398284 |
End bp | 398868 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642642766 |
Product | integrase family protein |
Protein accession | YP_001916566 |
Protein GI | 188585021 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00636105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGACAGAAA CTGTAAGATT CATGACCCAA AAAGAGTTAG ATAAATTGTT TCGAACTATA GAGAAAAGCA AAGATAAGCA CTGGCTACGT GATATAACCA TGTTTAGGAT AGCTTATCGG TGCGGGTTGA GAGCTTCTGA AGTTGGGTTG ATACAGGTAT CAGATTTTAA TCCAAAGATG AATGAACTAT ATGTTAGACG GAACAAAAAC TCTCTTAATA ATACAATTAG GTTGGATAAT AAAACTGCTC GCTACCTTAA GAAATATATC AAATCCTATC AATTGAAAGA GAACGAGATA ATGTTCAAAA GCCAAAAAAG GTCACCAATT TCACGGCAGA ATTTGGACAG GATTATGAAG AAGTACTGTG AAAAAGCAAA AATAAAAGAT GTTACAAATT GGCATTTCCA CGTGATGAAG CACTCCATAG CAGTTCACCT AGCTGAAACG GGTCTGGACG TGAAAGAGCT TCAGCATTAC TTGGGACATA GGAACATAGC TAGCACCCTG GTATATTTTC AATTTACAAC CAGACAGCAA GACGAAATGT ATCAGAAGAT AAGCAAGAAC AATCAATTGG TGTAA
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Protein sequence | MTETVRFMTQ KELDKLFRTI EKSKDKHWLR DITMFRIAYR CGLRASEVGL IQVSDFNPKM NELYVRRNKN SLNNTIRLDN KTARYLKKYI KSYQLKENEI MFKSQKRSPI SRQNLDRIMK KYCEKAKIKD VTNWHFHVMK HSIAVHLAET GLDVKELQHY LGHRNIASTL VYFQFTTRQQ DEMYQKISKN NQLV
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