Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0349 |
Symbol | |
ID | 6316171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 361953 |
End bp | 362675 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642642734 |
Product | ABC transporter related |
Protein accession | YP_001916534 |
Protein GI | 188584989 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00568927 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTAAAGT TGGATATAAG CAACATAGAA AAAAAGTTTG AATCAGTTCA AGCTATATCA GAGTTTTCCA CTACAATTCA TGGAGGACAG ATAGTAGGGT TAGTGGGTCC AAATGGGGCA GGAAAAAGCA CATTACTTAA AATTATTGCC GGTTTCTTAG AAGTTACCCA AGGATCAGTT AATATATATA AAGCAGACGA TCCCTATAGT AAAAGTTCTG TGTCTTATAT GCCTGAACGC CCTGACTTAT TTCCAGTACT TAATGTATGG GAACATTTTA AGTTTATGGG AATTGCTTAT AATATTTCTG ACTGGGAAAT TAGAGCAAAA TCCTTAATTG AAAGGTTTAG TTTATATGAT AAGGAAACAG CTTTTGCTGG CGAATTATCA AAAGGAATGA AGCAAAAGTT AATGTTATCC TTATCCCTAT TGCGTGAGCC TGAAATTATT TTATTAGATG AGCCTTTTTC AGGACTTGAT CCACATTCTA CATATCAACT AAGAGAATTA ATTTCACAAC TGAAATCAGA CAATAGAATT ATTTTTGTTT CAAGTCATAG TTTAAATGAT TTATATAGGT TATCTGATAA AATTTTAATA ATTAATCGTG GACAATTAAT TAGAGATCAA AGTAAGGAAA GCATAATGGC TGAACTTAAA AAGAAAGATT ATTTATCAAT CGAGGATCTC TTCTTGGAGG TAACTGATTA TGAGTGCCGT TAA
|
Protein sequence | MLKLDISNIE KKFESVQAIS EFSTTIHGGQ IVGLVGPNGA GKSTLLKIIA GFLEVTQGSV NIYKADDPYS KSSVSYMPER PDLFPVLNVW EHFKFMGIAY NISDWEIRAK SLIERFSLYD KETAFAGELS KGMKQKLMLS LSLLREPEII LLDEPFSGLD PHSTYQLREL ISQLKSDNRI IFVSSHSLND LYRLSDKILI INRGQLIRDQ SKESIMAELK KKDYLSIEDL FLEVTDYECR
|
| |