Gene Nther_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0336 
Symbol 
ID6316179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp352285 
End bp352971 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content35% 
IMG OID642642721 
ProductABC transporter related 
Protein accessionYP_001916521 
Protein GI188584976 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0600592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAAAGC TGATTAGAGT TGATAATGTA AGCTATAGTT ATAATGGTAC AGAACAGGTT 
TTAGATGGGA TGAATTTGAC TCTTTCTGAT GGTAAATTGA CTGCTTTAAT AGGTGCTAAC
GGAAGTGGTA AAACCACCCT GGGAAAATTA ATGGCGGGGG TTTTACAACC AACTTCAGGA
CAAGTATTAA TTGACGATAA AGATACCAGA GAAATGTCCC TCGGAGAAAT TGGAAAAAGA
ATAGGTTATC TATTTCAAGA ACCAGACAGA CAAATATTTG CTCCAACTGT GGAAGAAGAG
CTGTCCTTTG TATTAAAAGT CAGAGGGTTC TCAGATAATG AAATAAGTGA ATTGGTAAAT
GACATGTTGT CCTTGTTTCA CCTGGATCAT TTAAGGTCTA GTTTTCCCTT TTATTTAAGT
AAGGGAGAGA AACAGCGCCT TGCTCTAGCC TCAATACTAA TTAATAAACC TGATTTTTTA
ATTTTAGATG AACCAACAAC AGCTTTAGAT ATAAAACGTA AGTCTGAACT TTTGGAAATA
TTAAAGAAGC TTTTAGATAA CGATGTTGGT ATGCTGATTA TAAGTCATGA TTACGAATTT
GTTACTCAAT ATGCTGATAG GATTATTAAG ATAGCTGGAG GTGAGATTAT TAGTGACACA
CGAACAAGTG CAGAACAATC AATATGA
 
Protein sequence
MIKLIRVDNV SYSYNGTEQV LDGMNLTLSD GKLTALIGAN GSGKTTLGKL MAGVLQPTSG 
QVLIDDKDTR EMSLGEIGKR IGYLFQEPDR QIFAPTVEEE LSFVLKVRGF SDNEISELVN
DMLSLFHLDH LRSSFPFYLS KGEKQRLALA SILINKPDFL ILDEPTTALD IKRKSELLEI
LKKLLDNDVG MLIISHDYEF VTQYADRIIK IAGGEIISDT RTSAEQSI