Gene Nther_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0335 
Symbol 
ID6316178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp351522 
End bp352208 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content34% 
IMG OID642642720 
ProductABC transporter related 
Protein accessionYP_001916520 
Protein GI188584975 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0378349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTTTC CTGTCGAGAT AAATAATCTT GGCTTCAGGT TCCCCAGTAA CAGCAGTGAT 
TTATTACAAA ATATCAACCT AAAGGTCAAA GAAGGAGAAG TACTGGCAAT TGTAGGCCTT
AGTGGATGCG GGAAAAGTAC CTTGTGTTAC TGTATTAGCG GTATTATTCC TTTAATAAAA
CAAGGAGTTA TGGAAGGGGA AGTATTAATT AATGGTAGAT CCACACAGGA ATTAAGTTTA
TCACAAATAG CTACTAATTT GGGGATCGTT TTTCAAAATC CGGAAACCCA GTTGTTTTCA
CCTACCGTTG AGGATGAGAT TGCTTTTGGA CCAGAAAATT TATGTTTTGC AAGAGATGCA
ATAGAAAAAA GGGTTGATGA ATCCCTTAAA AAAGTAGGAA TGGAACAACA AAGATACAAA
AATCCTCATC ATCTTTCTGG AGGACAAAAG CAATTAATAG CTCTAGCCTC TGTTTTAAGC
TTGAATCCTA AAATACTAAT TTTTGATGAA GCCATGTCCA AATTAGATCC TGATGGTAAA
AAAATGATCA AAGATTTAAT TATTGATCTA AAGAATGAAG GAAGAACAAT TATTATGGTT
GAGCATGATA TGGCTAATCT AAATATAGCT GATAGAGTGA AACTTTTAGA TGGTGGGAAA
CTGACTGATT TTACAGGAAG TTTATAA
 
Protein sequence
MSFPVEINNL GFRFPSNSSD LLQNINLKVK EGEVLAIVGL SGCGKSTLCY CISGIIPLIK 
QGVMEGEVLI NGRSTQELSL SQIATNLGIV FQNPETQLFS PTVEDEIAFG PENLCFARDA
IEKRVDESLK KVGMEQQRYK NPHHLSGGQK QLIALASVLS LNPKILIFDE AMSKLDPDGK
KMIKDLIIDL KNEGRTIIMV EHDMANLNIA DRVKLLDGGK LTDFTGSL