Gene Nther_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0310 
Symbol 
ID6316143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp326660 
End bp327667 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content37% 
IMG OID642642696 
Product1-aminocyclopropane-1-carboxylate deaminase 
Protein accessionYP_001916496 
Protein GI188584951 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID[TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGT TTAAGAAAGC GTTAACAAAG AGAGTATCAT TAGTATCAGA ACCTACGCCC 
TTACGTGAAA GCAAGAATAT GTCGGACAAG CTAAATCAGC AACTATTAAT TAAAGAAGAT
GATACTACTG GGATTTGTTT AGGAGGAAAC AAAGTAAGAA AGCTTGAATA CTTGATCTAT
GATGCTTTAG AAAAAGAAGT TGATACAGTG ATTACAACAG GAGGACTTCA ATCCAACCAC
GCTCGCCTGA CAACTGCCAT TGCTAGGAAA TATAATTTAC AACCCGAATT AGTTTTAAAG
GATCAGGGCA AGAAATCCAA TGGTAATGTA TTACTAAATC AATTAATGGA TGCAAATTTC
CATCTGGTTC AGGACGAAAA AGAAATAGAT CAGAAAATTA GTCAGTTACG AGACGAATTA
CAAAATCAAG GTAATAAAGC CTATACTATT CCTCTAGGTG GCTCTAATGT AATTGGTGTA
ATGGGATATG TAAGAGCAGC TCTAGAATTA AGAGAACAAC TTGATAATAG GAATATAGGT
GAAGCAACGG TGGTTTTACC AGTAGGATCA GGTGGTACCC TGGCTGGCTT AGTACTGGCA
AATAATCTAT GGGATTTAAA CCTAAATTTT GTAGGAATTA GTGTCAGTAG ATCTAAAGAT
ACCATGAACA ATCTTATTTC AGAATTTGTT GATGAAGTGG TAGATAAATA TTCGCTTAAT
GTATCTCGAG AAAATATTCC GAAAATTTTT GATGAGTTTG TAGGGCCTGG TTATGGGATC
CCCGATGAAG ATACAATTGA CGCAATCAAA TTTGCAGCTA AAGCAGAAGG AGTCATCTTA
GATCCTGTGT ATACCGGTAA GGCAATGAAG GGTTTACTTC ATTTAAAAGA AACTAATACA
TTATCAGGAC CAGGATCCTC CTTTGATCCA GAGCATCCAA TAATCTTCTG GCATACCGGT
GGCATGCCGG CTGTATTTGC CTATGAAGAG GAATGTAAAA ATAACTAA
 
Protein sequence
MEEFKKALTK RVSLVSEPTP LRESKNMSDK LNQQLLIKED DTTGICLGGN KVRKLEYLIY 
DALEKEVDTV ITTGGLQSNH ARLTTAIARK YNLQPELVLK DQGKKSNGNV LLNQLMDANF
HLVQDEKEID QKISQLRDEL QNQGNKAYTI PLGGSNVIGV MGYVRAALEL REQLDNRNIG
EATVVLPVGS GGTLAGLVLA NNLWDLNLNF VGISVSRSKD TMNNLISEFV DEVVDKYSLN
VSRENIPKIF DEFVGPGYGI PDEDTIDAIK FAAKAEGVIL DPVYTGKAMK GLLHLKETNT
LSGPGSSFDP EHPIIFWHTG GMPAVFAYEE ECKNN