Gene Nther_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0193 
Symbol 
ID6315930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp219714 
End bp220025 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content39% 
IMG OID642642576 
ProductSSU ribosomal protein S10P 
Protein accessionYP_001916380 
Protein GI188584835 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000113928 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.060255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA AGCAAAAAAT TCGTATCCGT CTCAAAGCTT TTGATCATAT GATTTTAGAT 
CAGTCGGCGG AAAAAATTGT AGAAACGGCT AAAAGAACTG GCGCAAATGT TAGTGGCCCG
GTGCCGTTGC CTACTGATAA AAATGTCTAT ACTGTTATTA GGGCCCCGCA TAAATTTAAA
GATTCGCGCG AACAATTTGA AATGCGTACT CACAAGCGTT TAATAGACAT TCTAGACCCA
ACATCAAAAA CAGTAGACTC TTTAATGAGA TTAGACTTAC CGTCGGGTGT AGATATTGAA
ATCAAGCTGT AA
 
Protein sequence
MANKQKIRIR LKAFDHMILD QSAEKIVETA KRTGANVSGP VPLPTDKNVY TVIRAPHKFK 
DSREQFEMRT HKRLIDILDP TSKTVDSLMR LDLPSGVDIE IKL