| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0190 |
|---|
| Symbol | |
|---|
| ID | 6315948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 215779 |
|---|
| End bp | 216249 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642642573 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_001916377 |
|---|
| Protein GI | 188584832 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000054268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.00360958 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGA AAGGACCAGC TCCAAAACGA GACGTAAATC CGGATCCAAT TTATAATAGT
AAAATGGTCA CTAAATTTAT AAATAAATTA ATGCTCGATG GTAAAAAAGG ATTGTCTCAA
AGGATTTTTT ATAAGGCTTT AGAACTCGTA GGAGAGCGTA CTAATGAAGA ACCATTGGAA
GTATTTGAAA CAGCAGTAAA AAATGTTATG CCGGTATTGG AAGTCAAAGC TCGCCGTGTA
GGTGGTGCGA CCTATCAGGT ACCGGTAGAG GTTGAGCCTA ATAGGAAGCA AGTGCTTGCC
ATTAGGTGGA TAGTTAATTA TGCCAGAGAA AGAGGCGAAC GGGCCATGAG TGAGCGTCTG
GCTGGTGAAT TAATCGACGC TTACAATAAC ACTGGTGGTG CTATTAAAAA GAAAGAAGAT
ACTCATAAAA TGGCTGAAGC GAACAAAGCT TTTGCTCACT ACAGATGGTA A
|
|---|
| Protein sequence | MSRKGPAPKR DVNPDPIYNS KMVTKFINKL MLDGKKGLSQ RIFYKALELV GERTNEEPLE
VFETAVKNVM PVLEVKARRV GGATYQVPVE VEPNRKQVLA IRWIVNYARE RGERAMSERL
AGELIDAYNN TGGAIKKKED THKMAEANKA FAHYRW
|
|---|
| |