| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0186 |
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| Symbol | |
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| ID | 6315944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 207673 |
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| End bp | 211197 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642642569 |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_001916373 |
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| Protein GI | 188584828 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.648806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAC CTGCATCTGA AAACCTAAGA AGAAGTTATT CAAAGCTTGA TGAGGTCTTT
GAATTACCTG ATTTAATTGA AATTCAAAAA AGTTCTTATC AATGGTTTCT GGATGAAGGA
CTTAAAGAAA TGTTTGATGA CATATCACCG ATAGAAGATT TTACCGGTGG TTTAGTTTTG
GAATTTGTGG ATTATTCCTT AGGAGAACCT AAATATTCTG TTGAGGATTG TAAAGAACGA
GATGTAACTT ATTCAGTACC TTTAAAGGTG AAAGTAAGAC TAGTGAACCA AGAGACTGGC
GAGGTCAAAG AACAAGAAGT CTTTATGGGA GACTTTCCTT TAATGACTGA AAATGGGACT
TTCATCATAA ATGGGGCTGA GCGAGTTATA GTCAGTCAGC TAGTACGTTC TCCAGGAGTA
TATTTTAGTA GTGAAATTGA TTCAAATGGA AACACACTAT ACTCGGGCAC TATTATTCCT
AATCGAGGTG CCTGGCTAGA ATTTGAAATG AATGCCCAAA ATGTTATTTC CGTTAGGGTC
GACCGCACTA GGAAATTACC TGTAACAGTA CTAATAAGAG CTTTAGGATA TGGTACAGAC
GACGATATTT TCCATCTATT CGGTGAAGAT CCTAGAATAA AAGCCACACT AGAGAAGGAT
CATACCGATT CCTACGAGGC TGGTATTCTT GAGATCTATA AACGCTTAAG ACCTGGAGAG
CCTCTAAATG TTGAAAATGC TAAGAGTCTA TTTGAGTCCC TATTTTTTGA CCCCAAGCGT
TATGACTTAG CTAAAGTTGG GCGCCATAAG ATTAATCAAA AATTAGAGTT AGGCGATCGA
CTTCTTGGCA AAACAGCTCG GGAAACAATC ACAGATGATG AAACCGGTGA GGTAATTATA
GAAGAAGGAA CAGTTATTGA CACTCAAGAT TTGGAAAAAC TTGAGCAATC AGGCATCACT
AGTATTCGTA TTGGTAAAGA TGATCAGGAA GACAGGGACT GTGTTGTCCT AACTAATGGT
GATGTGGATA AAAATGTAAA GAACCTGACA AGAAATGATA TTGTAGCATC AATTGGATAT
ATGCTAAACC TTTTAGATGG ATTAGGCTTT GTTGATGATA TTGATCACTT GGGTAATAGG
CGATTGCGTT GTGTGGGGGA ATTGTTACAA AATCAATTCC GAATAGGTCT TTCTAGAATG
GAAAGAGTAG TAAGAGAGAG AATGACTATT CAAGATGTGG ATTCCATCAC CCCCTCAGCC
CTGATAAACA TTAGACCTGT AATCGCATCA ATTAAAGAAT TCTTTGGAAG CAGTCAGCTT
TCACAATTTA TGGACCAAAC TAATCCTTTA GCAGAACTTA CCCATAAACG AAGATTAAGT
GCATTAGGTC CCGGTGGACT AAGCCGTGAA AGAGCCGGTT TTGAAGTTAG AGACGTACAT
CATTCACATT ATGGAAGAAT GTGTCCTATC GAGACTCCAG AAGGACCGAA TATCGGCTTG
ATCAGTTCTC TGTCATCTTA CGGAAAGGTT AATGAGTTTG GTTTTATTGA AACTCCATAT
AGAAAAGTAG ATAAAGAAAA TGGACTGGTC ACAGAAAAGA TTGAGTATTT ATCTGCTCAT
GAAGAAGATA AATATGTAAT CGCCCAGGCA AACACTCCTT TAGATAGCGA TGGTTACTTT
AGTTCCGATA GAATTACTGC TCGTTATCGT CATGAAACTT TAATTACCAC TCCCGACAAA
ATTGATTACA TGGATGTGTC TCCTCGACAG TTAGTAAGTG TTGCTACAGC ACAAATACCA
TTTTTAGAAA ACGACGATGC GAACAGGGCT TTGATGGGAA GTAACATGCA GCGTCAAGCT
GTTCCGTTGC TACAAACAGA GTCACCTTTG GTGGGTACTG GAATGGAATA TAGAACAGCT
TATGACTCTG GAGCAGTTGT TAAAAGCCGA GCCGATGGTA CAGTTGATAA GGTGCAATCT
AACGAAATAT GGGTTAGAAG AAATGATAAT GCTAAGGGCC GTGTTGTTAA CGGACGAACT
GGTGAGGTTT TTGAAGGCGA AACAGGAGAG GTAAGAGCAG GTTACGATAT TTATAAACTG
CAGAAATTCC AACGTTCTAA CCAAGGGACT TGTATGAATC AAGTACCCAT TGTTGAGGAA
GGCCAACAAA TCACAGAAAA TCAAATACTA GCAGATGGTC CTTCTACTGA CAATGGTGAA
ATTGCTTTAG GTCAAAATGT CCTGGTAGGC TTCATGCCAT GGGAAGGTTA TAATTACGAG
GACGCTATTT TGATTAGCGA AAAATTAGTA AAGGACGATA CCTTTACTTC CATTCATATA
GAAGAATACG AAGCTGAGGC AAGAGATGCT AAATTAGGTC CTGAGGAAAT TACTAGAGAT
ATTCCCAATG TGGGTGAAGA TGCTCTTAAG AACTTAGATG AGCGTGGAAT AGTTCGGATT
GGGGCTGAAG TCAAATCAGG AGATATACTA GTAGGTAAAG TCACTCCTAA AGGTGAAACA
GAACTAACAG CTGAGGAGCG TTTATTAAGA GCTATCTTTG GTGAGAAAGC ACGAGAAGTT
AGAGACACAT CATTGAAAGT ACCTCATGGT GAACATGGTA TTGTTGTTGA TGTGAAAGTG
TTTAATAGAG ATGATGGGGA CGAGTTACCC CCAGGGGTAA ATCAACTAGT TAGGGTTTAT
ATCGCTCAAA AACGTAAAAT TTCAGAAGGT GACAAAATGG CAGGGCGCCA CGGAAATAAA
GGTGTTATTG CCAAAATTTT ACCTGAAGAA GATATGCCCT TTTTACCTGA TGGAACTCCT
TTAGAAATTA TTCTAAGTCC TCTAGGTGTT CCTTCAAGGA TGAACTTAGG TCAGGTTCTA
GAAACCCACC TAGGTTGGGC TGCCAAAGCC TTAGGATTAA AAATGGCATC ACCAGTTTTC
GATGGAGCGG ATGAAGATGA GATCCTTGAA ACTCTCAAAG AAGCAGGCCT ACCTGAAAAC
GGTAAGACTC AATTGGTTGA CGGTAGGACA GGAGAGCCCT TTGACAATGA GGTTACTGTT
GGATATATCT ACATGCTGAA ACTAGCTCAC TTAGTTGACG ACAAAATTCA CGCTCGTTCA
ACAGGTCCTT ATTCACTAGT TACTCAGCAG CCTCTAGGTG GTAAGGCACA GTTTGGTGGT
CAGCGTTTTG GAGAAATGGA AGTTTGGGCC CTTGAAGCTT ATGGTGCTGC TTACAGTCTA
CAAGAATTGC TCACAGTTAA GAGTGACGAT GTCGTTGGTA GAGTTAAGAC ATACGAATCA
ATTGTCAAAG GCGACAATGT TCCTGAACCG GGAATACCTG AATCATTCAA AGTACTAATC
AAAGAGTTAC AGAGTTTAGG AATGGATGTC AAAGTGCTTA ATGAAGAACA AGGATTAGTA
TCTATTAAAG ATGGTGAAGG AAATGAAGAG GTTGTATCGG TAGAAGATTT GAATTTGGAT
TTAAAAGACG CAGACCAAGA TAGTTCAAGT CAGCGTGATG AATAG
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| Protein sequence | MAKPASENLR RSYSKLDEVF ELPDLIEIQK SSYQWFLDEG LKEMFDDISP IEDFTGGLVL
EFVDYSLGEP KYSVEDCKER DVTYSVPLKV KVRLVNQETG EVKEQEVFMG DFPLMTENGT
FIINGAERVI VSQLVRSPGV YFSSEIDSNG NTLYSGTIIP NRGAWLEFEM NAQNVISVRV
DRTRKLPVTV LIRALGYGTD DDIFHLFGED PRIKATLEKD HTDSYEAGIL EIYKRLRPGE
PLNVENAKSL FESLFFDPKR YDLAKVGRHK INQKLELGDR LLGKTARETI TDDETGEVII
EEGTVIDTQD LEKLEQSGIT SIRIGKDDQE DRDCVVLTNG DVDKNVKNLT RNDIVASIGY
MLNLLDGLGF VDDIDHLGNR RLRCVGELLQ NQFRIGLSRM ERVVRERMTI QDVDSITPSA
LINIRPVIAS IKEFFGSSQL SQFMDQTNPL AELTHKRRLS ALGPGGLSRE RAGFEVRDVH
HSHYGRMCPI ETPEGPNIGL ISSLSSYGKV NEFGFIETPY RKVDKENGLV TEKIEYLSAH
EEDKYVIAQA NTPLDSDGYF SSDRITARYR HETLITTPDK IDYMDVSPRQ LVSVATAQIP
FLENDDANRA LMGSNMQRQA VPLLQTESPL VGTGMEYRTA YDSGAVVKSR ADGTVDKVQS
NEIWVRRNDN AKGRVVNGRT GEVFEGETGE VRAGYDIYKL QKFQRSNQGT CMNQVPIVEE
GQQITENQIL ADGPSTDNGE IALGQNVLVG FMPWEGYNYE DAILISEKLV KDDTFTSIHI
EEYEAEARDA KLGPEEITRD IPNVGEDALK NLDERGIVRI GAEVKSGDIL VGKVTPKGET
ELTAEERLLR AIFGEKAREV RDTSLKVPHG EHGIVVDVKV FNRDDGDELP PGVNQLVRVY
IAQKRKISEG DKMAGRHGNK GVIAKILPEE DMPFLPDGTP LEIILSPLGV PSRMNLGQVL
ETHLGWAAKA LGLKMASPVF DGADEDEILE TLKEAGLPEN GKTQLVDGRT GEPFDNEVTV
GYIYMLKLAH LVDDKIHARS TGPYSLVTQQ PLGGKAQFGG QRFGEMEVWA LEAYGAAYSL
QELLTVKSDD VVGRVKTYES IVKGDNVPEP GIPESFKVLI KELQSLGMDV KVLNEEQGLV
SIKDGEGNEE VVSVEDLNLD LKDADQDSSS QRDE
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