Gene Nther_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0164 
Symbol 
ID6316546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp188118 
End bp188603 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content33% 
IMG OID642642542 
Producttranscriptional regulator, CarD family 
Protein accessionYP_001916351 
Protein GI188584806 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.475576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAAAA AAGGGGATAA AGTGGTTTAT CCCATGCATG GCGCGGGTGT TATTGAAGGG 
GTTGAAGAAC GGGAAGTTTT AGGTAAAAAA CACATGTATT ATATTATGAA GATTCCTGTG
GGAGATATGA AAGTTATGAT TCCCAAAGAA AGAGTTGATG CTATAGGACT TAGAGAAATC
GTTGATAAAA ATAGTGTAAA AAAAGTTTTG GCTATTTTAA AAGCTGAGGA AACTAATGTA
AATCACAACT GGAATCAAAG ATACAGGGCT AACTTAGAAA AAATCAGGAG CGGTGATATT
TACCAAGTCG CTGAAGTTAT TAGGAACCTG GTATTTTTAG ATGATGAGAA AGGTCTTTCA
ACAGGTGAAA AGAAAATGCT TGAAAATGCC AAGCAAATAT TAGTTAGTGA ATTAGTTCTT
GCTAAGGATA TTGAAGAAGA ACAAGCTCAT GAAATTATAA ATGATACTTT ATTAACAACT
TCATAA
 
Protein sequence
MFKKGDKVVY PMHGAGVIEG VEEREVLGKK HMYYIMKIPV GDMKVMIPKE RVDAIGLREI 
VDKNSVKKVL AILKAEETNV NHNWNQRYRA NLEKIRSGDI YQVAEVIRNL VFLDDEKGLS
TGEKKMLENA KQILVSELVL AKDIEEEQAH EIINDTLLTT S