Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0164 |
Symbol | |
ID | 6316546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 188118 |
End bp | 188603 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642642542 |
Product | transcriptional regulator, CarD family |
Protein accession | YP_001916351 |
Protein GI | 188584806 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.475576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTAAAA AAGGGGATAA AGTGGTTTAT CCCATGCATG GCGCGGGTGT TATTGAAGGG GTTGAAGAAC GGGAAGTTTT AGGTAAAAAA CACATGTATT ATATTATGAA GATTCCTGTG GGAGATATGA AAGTTATGAT TCCCAAAGAA AGAGTTGATG CTATAGGACT TAGAGAAATC GTTGATAAAA ATAGTGTAAA AAAAGTTTTG GCTATTTTAA AAGCTGAGGA AACTAATGTA AATCACAACT GGAATCAAAG ATACAGGGCT AACTTAGAAA AAATCAGGAG CGGTGATATT TACCAAGTCG CTGAAGTTAT TAGGAACCTG GTATTTTTAG ATGATGAGAA AGGTCTTTCA ACAGGTGAAA AGAAAATGCT TGAAAATGCC AAGCAAATAT TAGTTAGTGA ATTAGTTCTT GCTAAGGATA TTGAAGAAGA ACAAGCTCAT GAAATTATAA ATGATACTTT ATTAACAACT TCATAA
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Protein sequence | MFKKGDKVVY PMHGAGVIEG VEEREVLGKK HMYYIMKIPV GDMKVMIPKE RVDAIGLREI VDKNSVKKVL AILKAEETNV NHNWNQRYRA NLEKIRSGDI YQVAEVIRNL VFLDDEKGLS TGEKKMLENA KQILVSELVL AKDIEEEQAH EIINDTLLTT S
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