Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0154 |
Symbol | |
ID | 6314728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 178376 |
End bp | 179230 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642642532 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_001916341 |
Protein GI | 188584796 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.342426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTGG GTTTTCACAT GCCCCTTTCG GGTGGTGTGG GTAAACAATT AAATCGTGCT AGTGAATTAG GTATGGAATG TATACAAATT TTTTCAGGGA ATCCAACTAG CTGGAAGCCA GGCAAAATCA CACCAAAATC TCGAGATTTA TTTATAAAAA AACAGGAGGA ATTACAGATA AAACCTTTAG TGTTTCATAC TCCCTACTTG ATTAACCTGG CTTCTCCTAA AAATGATATT AGGGAAAAAT CAATCTACTT ATTGAATGCT GCCTTGGAAA AAGCCAAAGC TTACGATGCT CCTTATGTGG TAACTCATAT CGGTAGTCAT GTGGGTGAAG GAGTTGAAAA GGGAATTGAT CTGGTGAGTT ATAGTTTAGA AAAGATTATG GAGGATTGGC CTGAGGGGGT AGAATTACTA CTGGAAAACA CTTCAGGAGC TGGATCTACT CTAGGTGGTA GTTTAACCGA ACTTAAAAAA ATTATAGATA AATTTTCAGG AACCCAGGTG CTCGGGTGCT GTTTTGATAC TGCTCATGCT TGGGGTGCCG GTTACGACAT TTCAAATGTC AAGGAGGTAG AGACCACTCT GGAACTGGTT AATGAACAGC TGGGCCTGGA TTTGATCAAA GTTTGCCATG CCAATGATAC CAATGTCCCT TTAGGATCTA CTAAAGATAG GCATCAACAT ATTGGTGAAG GTAATATCAC AGATGAGGGA TTCGGTGCTT TGTTAACTCA TGATTCATTT ACACCAAAGG CAGTTATTAT GGAAACACCA AAAAATGGTA CAGACTGTGA CCAAATAAAC TTACAACGAT TAAAAAAGGT GGTTGGCAGG CATGAAGAAG AATGA
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Protein sequence | MRLGFHMPLS GGVGKQLNRA SELGMECIQI FSGNPTSWKP GKITPKSRDL FIKKQEELQI KPLVFHTPYL INLASPKNDI REKSIYLLNA ALEKAKAYDA PYVVTHIGSH VGEGVEKGID LVSYSLEKIM EDWPEGVELL LENTSGAGST LGGSLTELKK IIDKFSGTQV LGCCFDTAHA WGAGYDISNV KEVETTLELV NEQLGLDLIK VCHANDTNVP LGSTKDRHQH IGEGNITDEG FGALLTHDSF TPKAVIMETP KNGTDCDQIN LQRLKKVVGR HEEE
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