| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0137 |
|---|
| Symbol | |
|---|
| ID | 6316918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 160902 |
|---|
| End bp | 161681 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642642515 |
|---|
| Product | Ku protein |
|---|
| Protein accession | YP_001916324 |
|---|
| Protein GI | 188584779 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1273] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00395823 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 92 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGACCTT TATGGAAAGG AGCAATTAGT TTCGGCTTAG TTAACGTTCC TGTGAAAATG
TACGCTGCTA CCGAAAAAAA GAATGTAAAA TTTAGATACC TCCACAGGGA CTGTAATGCT
CCCGTAGAAT ATAAAAGAGT TTGTTCAAAC TGTAAAAAGG AAGTGCCTTA TGAAGAAATA
GTCAAAGGTT ATGAATATGA ACCAGGTAAG TTTGTAGTAC TAGAAGATGA AGACTTTGAG
GCATTGCCCC AGGAGGAAGC ACGTTCTATC AACATTGTTG AATTTGTAAA TTTATCAGAA
ATAGATCCAG TTTACTATGA TAAAACTTAC TATTTGACAC CTCAAGAAAC AGGTGAAAAA
CCATACCAAC TATTGAAACA AGTGTTGAAA GAAAAGGGAA AAGTTGCAGT TTGTAAAGTT
GTAATTAGAT CCAAGTCTAA TTTATCTTGT ATTAGAATTT ATGACGAAGT TTTGACTTTA
GAAACTATGT ATTTCCCTGA TGAAGTCAGA AATCCTAAAG AAGAACTAGA GATTGAAGAG
CAGCCAGAGG TCATGTCAAG GGAATTAGAG ATGGCTGGAC AATTAGTTGA CAGTTTAGAA
GGGGAATTTC AACCAGAGAA CTATCAGGAC GAATACCGTG AGCATCTCAT GGATTTAATT
AAGGCTAAAA TTCATGATGA AGATGTAACA ATTCCAGAGA GACCTAAAGA CGAACGTGTT
GTCAATTTGA TGGAGGCATT AGAAAAAAGT GTTGACTTAG TCAAAGAAAA ATCCGGATAG
|
|---|
| Protein sequence | MRPLWKGAIS FGLVNVPVKM YAATEKKNVK FRYLHRDCNA PVEYKRVCSN CKKEVPYEEI
VKGYEYEPGK FVVLEDEDFE ALPQEEARSI NIVEFVNLSE IDPVYYDKTY YLTPQETGEK
PYQLLKQVLK EKGKVAVCKV VIRSKSNLSC IRIYDEVLTL ETMYFPDEVR NPKEELEIEE
QPEVMSRELE MAGQLVDSLE GEFQPENYQD EYREHLMDLI KAKIHDEDVT IPERPKDERV
VNLMEALEKS VDLVKEKSG
|
|---|
| |