Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0132 |
Symbol | |
ID | 6316913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 157410 |
End bp | 157973 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642642510 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_001916319 |
Protein GI | 188584774 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00499196 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGGAGC TGTCAAAACA ACAATTGGCG GAATTAATAT CAAAAGCTAG TCATAATGAA CAAGCTTTTG AACAGCTATA CAATTATTTC TTTCCAAAAA TTTATCAATA CATTTATTAT CGAGTAAATA ATAAAGAAGT AACAGAGGAT CTTGTATCTG ATATTTTCCT TAAAGTTTTA CGAAATTTGA AATCTTTGAA AAAGCCCGAA GATTTTCAAA GCTGGATATA TTCTATTGCA CGTAATGCCC TGATAGATTA CTACAGAAAA AAGGGTAGAA AAAAAGAAGA GGCTTCTGAA GCTATATCCG ATGATGAAAC AGTTCTGATA GATACACCCG AAGATCATGT ATTACTAGAA GAACATTCAA AAGAAATTTT TAAACTCCTT GAAATTTTAT CTATAGAACA ACAGGAAGTT ATTCAATTAA GATTTGTAGA TGAATTGAAA ATTAAAGAAA TTGCCAAAGT ATTAGATAAA AGTGAAGGAG CTATTAAAGG TCTTTTATAT CGCGGACTAA ATAAACTATC CCGCCACCTA GACAGTAAGG AGGTGCAATC ATGA
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Protein sequence | MKELSKQQLA ELISKASHNE QAFEQLYNYF FPKIYQYIYY RVNNKEVTED LVSDIFLKVL RNLKSLKKPE DFQSWIYSIA RNALIDYYRK KGRKKEEASE AISDDETVLI DTPEDHVLLE EHSKEIFKLL EILSIEQQEV IQLRFVDELK IKEIAKVLDK SEGAIKGLLY RGLNKLSRHL DSKEVQS
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