Gene Nther_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0132 
Symbol 
ID6316913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp157410 
End bp157973 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content31% 
IMG OID642642510 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_001916319 
Protein GI188584774 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00499196 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGAGC TGTCAAAACA ACAATTGGCG GAATTAATAT CAAAAGCTAG TCATAATGAA 
CAAGCTTTTG AACAGCTATA CAATTATTTC TTTCCAAAAA TTTATCAATA CATTTATTAT
CGAGTAAATA ATAAAGAAGT AACAGAGGAT CTTGTATCTG ATATTTTCCT TAAAGTTTTA
CGAAATTTGA AATCTTTGAA AAAGCCCGAA GATTTTCAAA GCTGGATATA TTCTATTGCA
CGTAATGCCC TGATAGATTA CTACAGAAAA AAGGGTAGAA AAAAAGAAGA GGCTTCTGAA
GCTATATCCG ATGATGAAAC AGTTCTGATA GATACACCCG AAGATCATGT ATTACTAGAA
GAACATTCAA AAGAAATTTT TAAACTCCTT GAAATTTTAT CTATAGAACA ACAGGAAGTT
ATTCAATTAA GATTTGTAGA TGAATTGAAA ATTAAAGAAA TTGCCAAAGT ATTAGATAAA
AGTGAAGGAG CTATTAAAGG TCTTTTATAT CGCGGACTAA ATAAACTATC CCGCCACCTA
GACAGTAAGG AGGTGCAATC ATGA
 
Protein sequence
MKELSKQQLA ELISKASHNE QAFEQLYNYF FPKIYQYIYY RVNNKEVTED LVSDIFLKVL 
RNLKSLKKPE DFQSWIYSIA RNALIDYYRK KGRKKEEASE AISDDETVLI DTPEDHVLLE
EHSKEIFKLL EILSIEQQEV IQLRFVDELK IKEIAKVLDK SEGAIKGLLY RGLNKLSRHL
DSKEVQS