Gene Nther_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0124 
Symbol 
ID6317176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp147503 
End bp148741 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content40% 
IMG OID642642502 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase, GTP cyclohydrolase II 
Protein accessionYP_001916311 
Protein GI188584766 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTAA GTACCATTAA AGAAGCACTG GAAGATTTAA AAAATGGAAA AATGGTCATC 
GTAGTTGATG ATGAGGATAG AGAAAACGAA GGTGACTTGG TAATTCCCGC AGAAAAAGCA
ACTCCCCAGG CAGTTAACTT TATGGCTAAG TACGGAAGAG GCCTTATCTG TATGCCGATG
AAGGAGGAAA GGTTACAGGA GCTCGACATT CCTTTGATGG TAAATGACAA CACCGATGAA
ATGGGAACGG CTTTCACAGT ATCGGTAGAT TATAAAGATT GTCATACAGG CATATCTGCC
TACGAAAGGG CAATGACAGT TACTAAATTA ATAAAAGAAG ACAGCAAACC AGAGGATTTT
AATAGGCCTG GGCATATATT TCCTCTTGCG GCTCGTCAGG GTGGTGTTCT AAAGAGGGCC
GGCCATACAG AGGCTGCTAT TGACTTGGCT TATTTAGCAG GTTGTTACCC CGCTGGTGTT
ATATGTGAAA TAATGTCTGA TGATGGAACT ATGGCCAGGT TACCTGAATT AGAACAATTT
GCTAGAGAGC ACGACCTTAA AATTATATCA ATTGCCGACT TAATTTCTTA CAGGAGAAAC
TCAGAACAGC TTATCGAAGC AGTTGCTGAT ATTAATTTAC CAACAAAGTA CGGAGAGTTT
CAAGGAAAAT TATATCAAGA TACAATTTCT GGAGAGCATC ACTTGGCAAT AATTAAAGGT
GAACCTGATA AAGAAAAGGA GCCGGTTTTG GTTCGAGTGC ATTCGGAATG TTTGACCGGT
GATGTTCTAG GGTCAATGAG ATGTGATTGT GGAGATCAAT TGGCTAGCGC TATGCAGAAA
ATAGAAGAGG AAGGTGTAGG AGTAGTACTT TATATGCGTC AGGAAGGTCG TGGCATTGGT
CTGGCAAATA AATTAAAGGC CTATGAACTT CAAGATCAGG GGAAGGATAC TGTGGAAGCC
AATGAACTGT TAGGTTTTCC TGCTGATTTA AGAGATTACG GAATTGGTGC TCAAATTTTA
AAAGATCTAG GACTAACCAA GATTTTATTG ATGACTAATA ACCCCAAGAA AATTATTGGT
TTAAAAGGCT ATGGCCTAGA AGTGGAACAG AGATTAGCCT TGGAGGCTGA GGTTACACCT
CACAATAAAT GTTATTTACA AACTAAGCAA GACAAACTGG GACATATATT AAATGTCCAG
CAACAAAATG ACAACAAGGA GGAAAATTAT TATGAGTAA
 
Protein sequence
MTLSTIKEAL EDLKNGKMVI VVDDEDRENE GDLVIPAEKA TPQAVNFMAK YGRGLICMPM 
KEERLQELDI PLMVNDNTDE MGTAFTVSVD YKDCHTGISA YERAMTVTKL IKEDSKPEDF
NRPGHIFPLA ARQGGVLKRA GHTEAAIDLA YLAGCYPAGV ICEIMSDDGT MARLPELEQF
AREHDLKIIS IADLISYRRN SEQLIEAVAD INLPTKYGEF QGKLYQDTIS GEHHLAIIKG
EPDKEKEPVL VRVHSECLTG DVLGSMRCDC GDQLASAMQK IEEEGVGVVL YMRQEGRGIG
LANKLKAYEL QDQGKDTVEA NELLGFPADL RDYGIGAQIL KDLGLTKILL MTNNPKKIIG
LKGYGLEVEQ RLALEAEVTP HNKCYLQTKQ DKLGHILNVQ QQNDNKEENY YE