Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0122 |
Symbol | |
ID | 6317174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 145566 |
End bp | 146708 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642642500 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_001916309 |
Protein GI | 188584764 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACT GGATAAAAAA GGACCGCCAG TACATGGATC GGGCGCTGGA TTTAGCTTGG AAAGGTTGGG GGAAAACTAA TCCTAATCCC CTAGTAGGTG CAGTACTAGT AAAGAACGAT GATATAGTTG CCCAAGGTTA TCATGGTAGA TTAGGAGGGC CTCACGCAGA AGCTGTTGCT TTAGAAAAAG CCGGTAGAGA AGCTTCGGGA ACGACAATGT ATGTTACCCT TGAACCTTGT TGTCATTACG GGAAAACACC TCCATGCACA GATAAAATTA TTGAAGCTGG TGTTAAAAGG GTTGTAATTG CTTCTCTAGA TCCACACGAA AAAATGGCAG GAAAAGGTGT TAAAAAATTA AGGCAAGCAG GAATTAAAGT AGAAGTTGGA CTAAAAAAAG CTGAAGCTGA GAAGCAAAAT GAAATATTCA GAAAATATAT AGTAACAGGT TTGCCTTATA TGATTGGCAA ATGGGGGATG AGTTTAGATG GAAAGATTGC TACTCATACC GGTGATTCTC GTTGGATTAC ATCGGAAAAA GCCAGATTTG ACACTCATCG ACTTAGGGCG AGAGTAGCGG CTATTATGGT GGGAATCGGA ACTGTAAAAG CTGATGACCC TCTCCTAACA TGTAGGCATC CTAATTACCC TGGACAGCAC CCAGTAAGAA TCGTTGTAGA TTCTCATCTC AGATTATCTT TACAAAGCAA AGTATTAGAA AAAATTTCTG AGACTCCAAC TATTATAGCT ACCTCAGAAG AAATCAAGCA CAAATCAAAA GAAATGGAAA TTGCTAAACA GATTGAAAAT TTAGGAGGAG AAGTACTTTA CTTGCCCCAA ACTTCTACAG GAAAAGTGGA TATATTTGAA CTGGTGAAAC TTTTGGGTCA AAGAGGGCTA GATAGCGTGC TTGTTGAAGG TGGAGAAACT CTTCATGGAT CTTTAATAGA AGCTAATTAC TATGATAAGT ATATTGTTTA TCTCGGGAAC TTGGTAATTG GAGGTACTAA CTCACCTACA CCGGTTGGTG GAAAAGGTTT TCAAGCGCTA AAAGACAGCG TGATGTTAAA TAATATGGAA TATGAATATT TTGGTGATTC TATCAGGATT GAAGCGTATC CATTTCTAGA AAACCAAAGA TGA
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Protein sequence | MDNWIKKDRQ YMDRALDLAW KGWGKTNPNP LVGAVLVKND DIVAQGYHGR LGGPHAEAVA LEKAGREASG TTMYVTLEPC CHYGKTPPCT DKIIEAGVKR VVIASLDPHE KMAGKGVKKL RQAGIKVEVG LKKAEAEKQN EIFRKYIVTG LPYMIGKWGM SLDGKIATHT GDSRWITSEK ARFDTHRLRA RVAAIMVGIG TVKADDPLLT CRHPNYPGQH PVRIVVDSHL RLSLQSKVLE KISETPTIIA TSEEIKHKSK EMEIAKQIEN LGGEVLYLPQ TSTGKVDIFE LVKLLGQRGL DSVLVEGGET LHGSLIEANY YDKYIVYLGN LVIGGTNSPT PVGGKGFQAL KDSVMLNNME YEYFGDSIRI EAYPFLENQR
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