| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0112 |
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| Symbol | |
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| ID | 6314654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 129394 |
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| End bp | 130377 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642642485 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_001916299 |
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| Protein GI | 188584754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.518902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000116577 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACAAGA TGAAGTTAGG AAAGCTAACT TTAGATAATT GCATCATTGT TGCACCTATG
GCAGGAGTGA CCGATTACCC TTATCGACGA ATTTTGGCAA AATTTTCACC AGGCTTGATA
TGTGGTGAGA TGGTGAGTGC CAAGGGAATG GTGTATGGCA ACAAAAAAAC TGAAGAAATG
GTTATTCATC ACAATCAAGG AGTGCATTAT TCTCAACAGA TATTTGGCAG TGATCCCAAG
GTAATGGCAG ATGCCGCAGT GAAACTGGAG AATTTAGGAG TTGACTCCAT TGATGTAAAT
ATGGGTTGTC CAGCTCCCAA AATAGTCAAA AATGGAGAGG GTTCAGCTCT GCTAAAGAAA
CCTCATTTAG CTCAAGAAAT CGTCAGAGAA ATAGTCAATT CAGTAAACCT TCCTGTGACG
GTAAAGATTA GAAAGGGATT TGACAGAAAG TCGTCTGACC CACTGGAATT AGCTCTTAGA
TTGCAGGAAG TAGGAATCAA GGCTCTGGCA GTTCATGGGA GGACCTGTGA ACAGCAATAT
AGTGGCAAAG CGGATTGGGA AGTGGTTGCT AAACTTAAAA ACTATTTAGA TATACCTGTT
ATCGGAAATG GAGATATTTT CAGCTCTGAA GATGCTGTGT CTGCTTTGGA GATGACTGCT
TGTGATGGAA TTATGTTGGG CCGTGGACTA ATGGGAAATC CTTGGCTGAT TGAACAGACC
AAAGGAATGC TTATCAAAGA TGAGAAAATT GAGTCTCCAG AAATTCATGA GATTAAAAAT
GAGATGAAAA GTCATTTTGA AAATGCTATT AAATATTACG GTGAGTCAAA AGGCATAGCT
GAAATGAGAA AGCATATTTC ATGGTATCTA AAAAGTCTTC CTGGAAGTAC GAGCATCAAA
GATGAAGTCA TGCGGCTAAC TGATGTAAAC CAAATTTGGT TTAGTTTAAA TGAATATTTT
CAAGCTTTAG AAAAAAAGAG TTAA
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| Protein sequence | MNKMKLGKLT LDNCIIVAPM AGVTDYPYRR ILAKFSPGLI CGEMVSAKGM VYGNKKTEEM
VIHHNQGVHY SQQIFGSDPK VMADAAVKLE NLGVDSIDVN MGCPAPKIVK NGEGSALLKK
PHLAQEIVRE IVNSVNLPVT VKIRKGFDRK SSDPLELALR LQEVGIKALA VHGRTCEQQY
SGKADWEVVA KLKNYLDIPV IGNGDIFSSE DAVSALEMTA CDGIMLGRGL MGNPWLIEQT
KGMLIKDEKI ESPEIHEIKN EMKSHFENAI KYYGESKGIA EMRKHISWYL KSLPGSTSIK
DEVMRLTDVN QIWFSLNEYF QALEKKS
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