Gene Nther_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0103 
Symbol 
ID6316318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp119649 
End bp120980 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content39% 
IMG OID642642476 
Productpotassium uptake protein, TrkH family 
Protein accessionYP_001916290 
Protein GI188584745 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000278363 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.777620000000001e-18 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTAAGAG CAACCAGATT TAATCCTGCC AGGACATTGG TTTTAGGATT TTTATCATTG 
ATAATAATAG GAGCTGTACT TTTAAGCCTA CCTATAGCTA CAATAGAAGC CGGAAGATTG
CCCTTACTAG ATGCTTTATT TACAGCAACT TCGGCCGTTT GTGTTACTGG TCTGGTAGTT
GTGGACACCG GAACCACCTT TACTGTTTTT GGCCAAACTG TCATTATGCT ATTAATTCAA
GCAGGTGGCC TTGGTTTTAT GACTTCAGCT ACCTTGATTT TTTTGGCCCT TGGTCGTAAG
ATAACTTTGA GAGAACGTAT AGTTATTCAG GAATCATTGA ATCAATTTGA CTTGCAGGGA
GTTGTTCGCT TGGTCAGGTC AATATTAATA TTGGCTTTTT CTATTCAAGG TATAGCAACA
ATGATTTTGG GAATCAGGTT TTCACAAGAA CTGGGATGGG CTAAAGGCTT CTTTTTCGGT
TTGTTTCATT CCATCAGTGC ATTTTGTAAT GCTGGATTTG ACTTAATAGG TGATTTTCGC
AGCTTGATGC CGTATGTAAA TGATCCTTTA ATTTCACTCT TGCTCCCTTT ATTATTTATA
ATAGGTGGTT TGGGTTTTAC AGTTTTAGTC GATTTATACT TCACTCGTTA CATAACCAGG
CTGGGTTTTC ATACCAAAGT GGCATTGATC ATAACTGGGT CTTTTTTATT GATTGGCTTC
TTAACTGTGA CCCTTTTGGA ATGGAATAAC CCTAAAACTC TGGGTTCAGT AACAGGTGGG
GCGAAAATTT GGAGTGCGTT TTTCACTGCG GCAACACCAA GGACGGCAGG CTTTAATGTG
TTACCTACTG ATGAGCTAAA CCAGGCCACC ACTTTATTTA TAATGGTTCT CATGTTTATC
GGTGCTTCGC CAGCTTCAAC AGGTGGTGGT ATCAAAACTA CTACCTTTGG AACTTTACTT
TTGGCAGTCA TATCGGTAGT TAAGGGAAAA AATCAGGTGT CTTTTTTGAG AAAGCGAATT
CCATATAATC TGATTAGTAA AGCTTTGGCT ATTATATTCA TATCCCTAGG GATAGTAGTT
TTAGTGGCCA TGGTGCTTTT AGTGACAGAA GATGCTAATT TTGAAGAAGC CTTGTTTGAA
GCAATTTCAG CCTTTGGAAC TGTAGGATTA TCAAAAGGCA TTACCCCGGA TTTAAGCGCA
GTAGGAAGAA TAGTGGTTAT AGTAACCATG TTTGTTGGGC GAGTAGGTCC ATTAACACTG
GCTTTTGCCT TGGCGAAAGA ATCGGACGAT ACTGGTATTA AATATCCAGA AGAACGTCTG
TTAATCGGTT AA
 
Protein sequence
MVRATRFNPA RTLVLGFLSL IIIGAVLLSL PIATIEAGRL PLLDALFTAT SAVCVTGLVV 
VDTGTTFTVF GQTVIMLLIQ AGGLGFMTSA TLIFLALGRK ITLRERIVIQ ESLNQFDLQG
VVRLVRSILI LAFSIQGIAT MILGIRFSQE LGWAKGFFFG LFHSISAFCN AGFDLIGDFR
SLMPYVNDPL ISLLLPLLFI IGGLGFTVLV DLYFTRYITR LGFHTKVALI ITGSFLLIGF
LTVTLLEWNN PKTLGSVTGG AKIWSAFFTA ATPRTAGFNV LPTDELNQAT TLFIMVLMFI
GASPASTGGG IKTTTFGTLL LAVISVVKGK NQVSFLRKRI PYNLISKALA IIFISLGIVV
LVAMVLLVTE DANFEEALFE AISAFGTVGL SKGITPDLSA VGRIVVIVTM FVGRVGPLTL
AFALAKESDD TGIKYPEERL LIG