| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0099 |
|---|
| Symbol | |
|---|
| ID | 6316314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 113355 |
|---|
| End bp | 115148 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642642472 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001916286 |
|---|
| Protein GI | 188584741 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG3411] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.953797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000000556523 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTGT ATCGATCTCA TGTTTTGATA TGCGGTGGTA CTGGTTGTAG TTCATCCGGA
TGTCAACAAG TGCAAGATAA GTTTAATGAA GAATTAGATA AACACAATCT TTCGAATGAA
GTTAAGTTAA TAATTACGGG CTGTCATGGA CTATGTGAGC TCGGTCCTAT AGTTATCGTG
TATCCTGAGG GAACTTCCTA CTTTACCGTA TCAGCAGAAG ATGTGTCAGA AATAGTAGAA
GAACACCTTT TAAAAGGTCG CAAAGTAGAA CGATTAATGT ATCAAGATGA GGAAAGTGCG
GAAAAGATTC CTTACTATAA TGAAATTGGT TTTTATAAAC AACAGGAGAG AATTGTCCTA
AGCAATTGTG GTTATATCAA TCCTGAAAGC ATCGATGAAT ACATTGCTAG AGGTGGGTAT
CAAGGCCTTG CCAGGGCTGT CACAGAATTT GACCCCCAAG GAGTTACCGA AGAAGTTATT
AATGCAAACC TAAGAGGACG CGGTGGTGCT GGCTTCCCTG CAGGCAAAAA ATGGAAGTTT
GCTAGTCAAG AACCTGAACC AACAAAATAC ATGGTTTGTA ATGCCGATGA AGGTGACCCG
GGAGCCTTTA TGGATAGAAG TATTTTAGAG GGTGATCCTC ACAGTGTAAT AGAAGGAATG
GCCATTGCCA GCTATGCAAT AGGTGCGGAA GTTGGGTATG TTTATATAAG GGCTGAATAT
CCCTTGGCGG TTCGTCGTTT AAAAGAAGCA ATCCAGCAAG CAGAAGAACT GGGCCTTTTG
GGAGAGAATA TTCTTGGATC AGGATTTAAC TTTAAATTAA AAGTGAAAGA AGGTGCAGGA
GCCTTTGTTT GTGGCGAGAG TACTGCCCTC ACTAGGTCCA TTGAAGGTAG AAGGGGGATG
CCCAGACCAA CTCCGCCACG ATCTACAGAA AAAGGACTCT GGGGAAAACC AACAGTGCTG
AATAATGTAG AAACCTTAGC TTGTGTTTCC TTTATATTAT CAAAGGGCGC CGAAGAATTT
ACTAAGTTCG GAACAGAACA AAGTCCCGGT ACTAAAGTTT TTGCCTTGAC TGGTAAAGTG
AATAATACAG GACTTGTTGA AGTTCCCATG GGAATAAGTA TTAGAGATAT TGTTTTTGAC
ATTGGTGGAG GCATACAACA CGGAAATAAA ATCAAAGCTG TCCAAATTGG TGGTCCATCA
GGAGGTTGCC TTCCTGAAGA CAAACTGGAC TTATCAGTTG ACTTTGATAC ATTAGATGAT
GCGGGCGCTA TGATGGGCTC TGGTGGACTG GTAGTAATGG ACGAAGAGAC CTGTGTCGTA
GATGTATCTA AGTTTTTCCT TAAGTTTACT CAAGCCGAAT CTTGTGGTAA ATGTACACCA
TGTCGTGAAG GAACTAAGCG TATGTTAGAA ATTCTTGAGC GCATAACCAA AGGACAGGGT
GAGCCTAAAG ATATCGATCT CTTAAAAGAA CTTGGAGAAA TGATAATAAA CACTTCTCTG
TGTGGACTTG GGAAATCAGC ACCAAATCCA GTACTAAGCA CATTAAGATA CTTTGAAGAC
GAATACAGAG AGCATATTGA AAAGGGTCGT TGTCCTGCCG GAATTTGTGC TGATTTGGTT
AAGTATAAAA TTATTGCAGA TAACTGTATC GGATGTACGG CTTGTGTCAA AGTTTGTCCA
GTTGACGCAA TTTCTGGCGA GAAAAAACAA GCCCATGAAA TTGATCCGGA TAAGTGCATT
GGCTGTGGTG AGTGCTATGA AAAATGTAAA TTTGAAGCAA TAACTTTAGG CTAA
|
|---|
| Protein sequence | MEVYRSHVLI CGGTGCSSSG CQQVQDKFNE ELDKHNLSNE VKLIITGCHG LCELGPIVIV
YPEGTSYFTV SAEDVSEIVE EHLLKGRKVE RLMYQDEESA EKIPYYNEIG FYKQQERIVL
SNCGYINPES IDEYIARGGY QGLARAVTEF DPQGVTEEVI NANLRGRGGA GFPAGKKWKF
ASQEPEPTKY MVCNADEGDP GAFMDRSILE GDPHSVIEGM AIASYAIGAE VGYVYIRAEY
PLAVRRLKEA IQQAEELGLL GENILGSGFN FKLKVKEGAG AFVCGESTAL TRSIEGRRGM
PRPTPPRSTE KGLWGKPTVL NNVETLACVS FILSKGAEEF TKFGTEQSPG TKVFALTGKV
NNTGLVEVPM GISIRDIVFD IGGGIQHGNK IKAVQIGGPS GGCLPEDKLD LSVDFDTLDD
AGAMMGSGGL VVMDEETCVV DVSKFFLKFT QAESCGKCTP CREGTKRMLE ILERITKGQG
EPKDIDLLKE LGEMIINTSL CGLGKSAPNP VLSTLRYFED EYREHIEKGR CPAGICADLV
KYKIIADNCI GCTACVKVCP VDAISGEKKQ AHEIDPDKCI GCGECYEKCK FEAITLG
|
|---|
| |