| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0090 |
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| Symbol | |
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| ID | 6316361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 106768 |
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| End bp | 108393 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642642463 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001916277 |
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| Protein GI | 188584732 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00173924 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00306857 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTTTT TCAGATATCA AGTTCAGACT GTTGATAGAG TTGGAATGGT TCTCGATGTT
TTAAGAGTTG TATACTTAAA AAATATTAAT ATAACTGCTA TGGAAGTGGC ACCGCAGTTA
ATCTATTTGA AACTTGATTT TGCGCCTGCT ATGAAAGGGG CCTTAGAAAG CGCAGTCAAA
GAAATTCCTG GTGTTAGAGG GATTGATGAA ATTAGTCTGT TGCCTCAAGA AGAAAAAGAA
CAAAAACTCA GAGGTATTTT AGATACTATA GGAGAAGGAA TAATTGCATT AGACAAATCT
GGAATAATTA CTATGATTAA TCCCTCGGCA GAAAAGATTT TAAATCTATC AGAAAACATT
GAGGGTCGAG ACATTCGAGA TATACTTTCT GCTGAATTAC CCATATTAAA AACTTTGTCT
GCCGGGGAGG ATTATGACAA TAAGGAAATT TTTGTCACAC TACCTGGTGG TAAAAGCCAT
TATTTGACTT CAGGGAGACC TATCAAAAAC GATGATGGCA ATACTGTAGG AGCTGTAGCT
GCCATCAAAG ATATAAATGA AGTGCGTAAA TTAGTTCATC GGATTACTCA CCCGACCATG
CTATCTTTTG ACGATATAAT AGCTGAAAGT AGTATTATGA ATGAAACAAT TTCGTTTGCA
AAAAAAATTG CTCATGGAGA CTCTACCGTT CTGTTAACTG GGGAAAGCGG CACAGGAAAA
GAATTGTTCG CCAGAGCTAT TCATATGGAA AGTCCTAGGA AGGATTGTCC CTTTGTCCCT
CTTAACTGTG CTGCCATACC GGAAACACTG ATGGAAAGTG AATTATTTGG ATATGAAGAA
GGTGCTTTTA CGGGTGCGAA AAAAGGTGGA AAACATGGAC TGTTTGAGCT AGCTAACAAA
GGTACAGTAT TCTTAGATGA AATAGGTAAT CTCAATCCAC AATTACAAGT CAAATTACTC
AGAGTTTTAC AAGAAAGAGA AGTCCGCAGA ATAGGTGGAA AAGAGGAAAT TAGTGTCGAT
ATAAGGGTAA TCACTGCAAC AAACCATAAC TTAGAAAAGC TTGTTAATGA AGGTTATTTT
AGAGAAGACC TGTATTATCG CTTAAATGTT ATACCTATAA AACTGCCACC ATTAAGAAAT
AGAAAAGAGG ATATTATTCC TTTAGCAAAC CATATACTCG GGCAAATGAG GACTAATCAT
GGAGGACAGT ATCAACTTTC CCCAAAAAGT CGAGAACTGC TAAAAACTTA CTCTTGGCCC
GGCAATGTAA GAGAACTCGA AAATATAATT GAGCGTGCAG TTAATTTGGC TAATGACAAT
ATAATTGAAG GTGAACATTT ATTTTTTGGT CAAGAGGATG GTTTTTCAAA TTACGAAGGC
GAAATGGAAA ACTGGGAACA GAATCAACAG TATCAAAATG GTCAGAGCGA AGCAGAAATC
AGTGTAAATT ATAAAGACAA AGACTTTTCT CAAATATTAC AGTCAGTTGA AAAACAAATA
TTGCAAAAAG TTTTGAGTGA ACATGCAAGT GCCAGAAAAG CTGCTAAACA ATTAGGAGTT
TCCCATACTA CAATTTTAAA TAAAATTAAA AAATATGGGC TGCAAATTAA TCAAGAATCA
AACTGA
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| Protein sequence | MSFFRYQVQT VDRVGMVLDV LRVVYLKNIN ITAMEVAPQL IYLKLDFAPA MKGALESAVK
EIPGVRGIDE ISLLPQEEKE QKLRGILDTI GEGIIALDKS GIITMINPSA EKILNLSENI
EGRDIRDILS AELPILKTLS AGEDYDNKEI FVTLPGGKSH YLTSGRPIKN DDGNTVGAVA
AIKDINEVRK LVHRITHPTM LSFDDIIAES SIMNETISFA KKIAHGDSTV LLTGESGTGK
ELFARAIHME SPRKDCPFVP LNCAAIPETL MESELFGYEE GAFTGAKKGG KHGLFELANK
GTVFLDEIGN LNPQLQVKLL RVLQEREVRR IGGKEEISVD IRVITATNHN LEKLVNEGYF
REDLYYRLNV IPIKLPPLRN RKEDIIPLAN HILGQMRTNH GGQYQLSPKS RELLKTYSWP
GNVRELENII ERAVNLANDN IIEGEHLFFG QEDGFSNYEG EMENWEQNQQ YQNGQSEAEI
SVNYKDKDFS QILQSVEKQI LQKVLSEHAS ARKAAKQLGV SHTTILNKIK KYGLQINQES
N
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