| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0067 |
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| Symbol | |
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| ID | 6317200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 81091 |
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| End bp | 84681 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642642439 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001916254 |
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| Protein GI | 188584709 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATT TGGTTGACAT AATTCCTTAT GAAAATAGTT TACAAAATAT TATTGAAGAT
TTTTCTCCTA GGCGTAAGCG GAGTACTAAG CAGATGGTAT CAGGTATTAG CGGAAGTGAA
TTTCCATTAA TACTGGCAGG ATTGTTTAGA GCTTATGGCC GGCCAATCAC TCTAATAACA
TATGATAATT ACAGAGCGGA AAGCTTATAT TCAGATTTAG TTACACTGTT GGACAAAGAA
CAAGTTTATA TCTATCCGGA GCATCAAGTA TATCCTTTTG AACTAGCCTG GCAAAGTAGA
GATGTAAATA ACGAAAGAGC CCAGGTCCTA CAAGCTATGT TAAGTAAAAA ATCTGCTGTT
TATATATTTT CATTGAAGTC TGCTAAAGAA AAGCTATCTC CCGCTCAAGT TGTAAAACAG
ACATTTCTTA ACCTTGAAGT TGGGAATGAA AAGCTTTCTC CAACTATGAT TGCAGAAAAA
CTTACAGGAT TAGGTTATGA AAATACTTCT ATGGTTGAAC AAAAGGGGCA GTTTAGTCAT
AGAGGAGGCA TCATTGATGT TTTCCCTGTG GCAAGCGAAC TACCTGTCCG AATAGAGTTT
TTTGATGACG AGATAGAGTC AATTAGAGCT TTTGACCTAG CAACTCAACG ATCTTTAAAA
GAGTATAATA GCCTGGTAGT TGGACCAGGA AGTCAGCTTG TAATAGGAGA TAATACTAAT
TTATCTCAGG CATTGAATCA ACTGACTCGT GAATTTGAGC TACAAAAAGG TAAATTAATG
AAAGATGGAA TTACTGATCG ATCCGAGGAA TTAGAAGAGA GGATCAACAG GGATTTAAGT
TCCTTAGAAA ACGGGATCTC ATTACCTCAT TTTCATAGAT ATTTATCTTA TTTTTACCCA
AAAAATTATG GTACGATAAT AGATTTTTTA CCAACAAACT CTTTGTTTTG GGTTGATGAG
CCTAATAGGA TTAAAGAAAG TGACGAGTTT TATAATAATG AAATAACAGA ATTAGCGGAA
TCTCTAATTG AAGAAGGTAA AATTCTTCCT GGAGAAAGTA ATTTATTTTA TTCTATTGAA
GATGTGTTGT CAGGAAACCC CTTTGATACA ATTTATTCTG CTAATTTTTT ACGCCAGAAT
CCATTTGAAA ATGTGTCCCA GGCTACTAAT ATGTCAGTTA AGTCAATGAA TCAGTTTTAT
GGTCAGTGGG ATTTTTTTCT AAAAGAAATG AAACAGTGGA TGAATAACAA TTATCGCATC
ATCTTGTTTT CACCTACCCC GGAAAGTGCT AGAACATTAT ATGAAAATTT AAAGAAGGAA
GAAATCGGTG CGACTATTGT GGAGAAGGGT AATACTAAAA CAGAAAATCA AGTTGTTATT
GCTGTAGGAG ATTTAAAAAG TGGTTTTATA TTACAGGAAA GTAAATTAGC GGTAATTACT
TATGGAGATT TATGGGGACA TCAAAAGAAG AAAATACGTA GCAGAAAACG TGATAAGTCA
GAAGATAAAG CAGTGAAAGT ATCTGATTAT CGTGAACTTC AAGTTGAAGA TTATGTAGTT
CATGAAAAAC ATGGAATCGG CAAGTATATG GGAATAAAAA CGTTAGAAGT CGGTGGCTTG
TATAAAGACT ATCTCCATAT CAAATATGCC GGGAATGACA GCCTGTATGT TCCCACAGAA
CAAATTGATG AGATTCAAAA ATATGTTGGT AAGGAAGGAA AACCTCCTAA GCTTTATTCT
CTAGGAAGTA GTGAATGGCA AAAAGTAAAA CAAAGAGTAA AATCTTCAGT CAAAGAGTTG
GCAGAGGATT TATTAAAATT ATATGCCGAA CGAAGTTCGC GTAAGGGATA CGCATTTAGC
CAGGACACAC CATGGCAAAA AGAGTTTGAA GATTATTTCC CTTATGAGCT AACTCCGGAC
CAAAAAAAGG CCATTTCTGA GATCAAGGAG GATTTAGAAT CTGAACAACC TATGGACAGA
TTATTATGTG GGGATGTAGG GTACGGGAAA ACAGAAGTAG CAATGAGAGC AGCCTTCAAA
GCTGTCATGG AGGGGAAACA AGTCTGTGTC TTAGTACCAA CAACCATTTT AGCACAACAA
CATTTCCAAA CTTTTAAAGA GAGGTTTGCA CCATATCCTG TTGATATTCG TGTTATAAGC
CGTTTTAGTA GTCAAAAGGA TGAGAAACTA GTTAAAGAAG AAATGAAAGA AGGCAATGCT
GAGATTATCA TTGGAACACA TAAACTGTTA AATAAATCAG TCAAATTTAG AGACTTAGGT
TTATTAATAA TAGACGAAGA ACAGCGATTT GGAGTTCAAC ATAAAGAAAA AATTAAAATG
CTTAAAAAGA ATTTAGATGT GTTGACTATG ACAGCTACGC CAATTCCAAG AACTTTGCAT
ATGTCTTTAG TTGGAGTTAG AGATTTAAGT GTGATTGAAA CTCCTCCGGA AGGACGCTTT
CCTGTACAAA CTTATGTTAT GGAACATTCT CCTCAATTAA TTAGAGAAGC CGTTAACAGG
GAAATTAGCC GAGAAGGCCA GGTTTATGTT GTTCATAACA GAGTGAAGGG TATAAATAAA
GTAGCAAAGG AAGTAGCTGA TTGGGTGCCT GATGCCAAAG TAGGTGTTGC TCATGGTCAG
ATGCCCGAAA AACAATTGGA ACGAGTTATG TTAGACTTTT ACGAAGGTAA ATATGATGTA
CTAGTGTCTA CTTCCATAGT AGAAGCTGGA TTAGACATTC AAAATGTTAA TACAATCATA
ATTTATAATG CAGATCGTAT GGGCTTAAGC CAGCCATACC AGTTAAGGGG CCGAGTAGGA
AGAAGTAATC GAATGGCATA TGCATATTTA ACTTATCAGA AAGATAAAGT ATTAACACAA
GAAGCAGAAA AACGCTTAAA AGCAATCAAA GAGTTTACAG AACTGGGGTC TGGTTTTAAG
CTCGCTTTAC GTGACTTAGA AATTCGGGGA GCAGGCAATA TACTAGGGCC AGAACAACAT
GGACATATTA TGGCCGTAGG TTTTGATATG TACACAAAAA TGCTGAAAGA TGCTATTAAA
GAAATTTCTC AGGAAAGTCA AACTCAAGAA GAAACCACCA AGATTCAAGA TGACAAAACT
GAAGTTGAAA AACCAGAAGA AGTAAAAGTG GAGTTGAATA TTAATGCTTA TTTACCAACA
ACTTATATTT CTGATCATGA ACAAAAGATA ACTATTTACA AAAAAGCAAG AAGTATTAAC
TCCTATAGTG AAGCTAATGA CTTGGAAACG GAGTTAAAAG ACCGATTTGG TTCATTACCT
CAAGAAGTTA AAAACTTGCT AGATATTACT CGCCTGAAAG TTCTTGCCCG GGAAACAGGT
ATCATTTCTA TTACCAGGCA AGGCTATTGG GTACACTTGG ACTTAGATCC TCGTCAGAAA
ATTAGTGGGG AAAATTTAAT AAAATTAACT ACAAAATTCC CTGGGAAAAT CACAGTTTCT
TCTCAAACAG ATGGATTAAC CTTAAAAGTA AACGTTAAAA ACTTAAAAGA TTCGGGTTTA
ATGGACATGA TCAATAAAGT TGCCGAATCT TTGCTAGAGT TGGTAGCGTA A
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| Protein sequence | MSYLVDIIPY ENSLQNIIED FSPRRKRSTK QMVSGISGSE FPLILAGLFR AYGRPITLIT
YDNYRAESLY SDLVTLLDKE QVYIYPEHQV YPFELAWQSR DVNNERAQVL QAMLSKKSAV
YIFSLKSAKE KLSPAQVVKQ TFLNLEVGNE KLSPTMIAEK LTGLGYENTS MVEQKGQFSH
RGGIIDVFPV ASELPVRIEF FDDEIESIRA FDLATQRSLK EYNSLVVGPG SQLVIGDNTN
LSQALNQLTR EFELQKGKLM KDGITDRSEE LEERINRDLS SLENGISLPH FHRYLSYFYP
KNYGTIIDFL PTNSLFWVDE PNRIKESDEF YNNEITELAE SLIEEGKILP GESNLFYSIE
DVLSGNPFDT IYSANFLRQN PFENVSQATN MSVKSMNQFY GQWDFFLKEM KQWMNNNYRI
ILFSPTPESA RTLYENLKKE EIGATIVEKG NTKTENQVVI AVGDLKSGFI LQESKLAVIT
YGDLWGHQKK KIRSRKRDKS EDKAVKVSDY RELQVEDYVV HEKHGIGKYM GIKTLEVGGL
YKDYLHIKYA GNDSLYVPTE QIDEIQKYVG KEGKPPKLYS LGSSEWQKVK QRVKSSVKEL
AEDLLKLYAE RSSRKGYAFS QDTPWQKEFE DYFPYELTPD QKKAISEIKE DLESEQPMDR
LLCGDVGYGK TEVAMRAAFK AVMEGKQVCV LVPTTILAQQ HFQTFKERFA PYPVDIRVIS
RFSSQKDEKL VKEEMKEGNA EIIIGTHKLL NKSVKFRDLG LLIIDEEQRF GVQHKEKIKM
LKKNLDVLTM TATPIPRTLH MSLVGVRDLS VIETPPEGRF PVQTYVMEHS PQLIREAVNR
EISREGQVYV VHNRVKGINK VAKEVADWVP DAKVGVAHGQ MPEKQLERVM LDFYEGKYDV
LVSTSIVEAG LDIQNVNTII IYNADRMGLS QPYQLRGRVG RSNRMAYAYL TYQKDKVLTQ
EAEKRLKAIK EFTELGSGFK LALRDLEIRG AGNILGPEQH GHIMAVGFDM YTKMLKDAIK
EISQESQTQE ETTKIQDDKT EVEKPEEVKV ELNINAYLPT TYISDHEQKI TIYKKARSIN
SYSEANDLET ELKDRFGSLP QEVKNLLDIT RLKVLARETG IISITRQGYW VHLDLDPRQK
ISGENLIKLT TKFPGKITVS SQTDGLTLKV NVKNLKDSGL MDMINKVAES LLELVA
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