Gene Nther_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0055 
Symbol 
ID6316824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp68430 
End bp71114 
Gene Length2685 bp 
Protein Length894 aa 
Translation table11 
GC content39% 
IMG OID642642427 
Productcyanophycin synthetase 
Protein accessionYP_001916242 
Protein GI188584697 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase
[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAATTA TTAATATTAA AACAATTTCA GGCAAAAACA TATACAGTCA TGAACCGGTT 
CTAGAAGCAG AATTAGACTT AGGTGATTTT GCAGGGGTTT TCTCCAATAA TGTATCCTGT
TTTAATAGTA GGTTGCACCA AATTTTACCG TCTTTGCAGG AGCATGTCTG TTCTAGAGGA
TATCCTGGTG GATTTTTGGA ACGGTTGGAA GAAGGTACTT TGTTTGGTCA TATAATTGAG
CATGTAACTT TAGAATTAAT GAATTTAGCC GGCATTGGAA CCAATTATGG GACAACGAAA
GCCACTCAAG AAGACGGGAT CTATCAAGTG ATCGTGGAAC AGATCAATGA AGAAGGTGCC
AAATATGCTC TAGAACAGTC CGTTGAACTT GTGAAAAACG TCATAAATGA CAATCCCGTT
CAAGTAGAGG AAATAGTTAG CGAAATTCAA GAAATAGTTA ACGAAACGAA GATTGGTCCT
AGTACTGAAG CAATTTTATC AGCTGCCGAG GAACAGGAGA TTCCTTATCT CAAACTGGAT
GAAGCTAGTA TGTACCAACT GGGCACAGGC AAGTATCAAA AGAGAATCCA GGCTACTGTA
ACTGATGAAA CTTCTGTAAT AGGAGTGGAT ATAGCCTGTG ATAAAACCAA AACAAATAAC
TCCTTGCATG AATTAGGTTT ACCAGTTCCT TATGGCAAAA TAGCAAGTAC TGAGGAAGAA
GCAGTAGCTA TTGTACAGGA GATTGGATAC CCTATTGTTA TAAAACCCAG AGATGGAAAT
CAGGGAAAAG GAGTTACATT AAATATCAAC TCAGAACAGG AAACTAGAAG TGCCTTTAAA
GTAGCTATGA GCTACGGGGA TGAGGCGATT GTGGAACAGC ATATTGAAGG AAAGCATTAC
CGTCTTGTAG TAGTAGGGGA TCAATTGGTG GCCGGAGCTG AAAGAATCCC TGCCCATGTA
GTGGGAGATG GTCAACATAC CATTAGAGAG CTAGTAGATA TTGAAAATCA AAATCCACTT
AGAGGTTTTG GTCATGAGAA ACCTCTATCA AAAATTCAAT TGGATCCAGT AGTTAATATG
GTATTGGCTC GTAAGAATAT GACTATGAAT TACATCCCCC AACAAGATGA ACTAGTATAT
TTACGGGAAA GTGCCAATCT TAGCACGGGT GGAATTAGTT TGGATGTTAC TGATGAGATT
TCTGATAAAA CTATACGGAT AGCCATCAGG GTAGCTAAAA TAGTTGGATT AGATATAGCC
GGTGTTGATC TGGTAGCTAA GGATATTGGG AAACCCGTGG ATGAAGATGA TAATGGGGCT
ATTATTGAAG TCAATGCTGC CCCAGGAATA AGAATGCATG AACATCCTGT GAAAGGCCAT
CCTCGAAGAG TAGGAAAAAG TATTGTAGAT CACTTGTTTA ACAAACGAAA TGATACTTTA
CAGGCAAGAG CGCCAGTAAT TTCAGTTACA GGTACAAACG GCAAAACAAC TACTGTTAGA
GCAATTGATC ATATATTGAG ATCAAATGGA AAAGATGTGG GCATGACAAG TAGTGATGGT
ACTTTTATCA AAGGAGAATT GATCGATTCT GGTGACAATA CAGGCCCGAA TAGTGCTAAG
GCTTTATTAA AAGATCCGAC AATTGATTCA TTTGTGTTTG AAACAGCCCG AGGTGGACTG
GTAAAAAATG GGCTAGGTTA TTCAAATGCC AAAGTGGCAG TAGTGACTAA TATCGCAAAT
GATCACCTGG GCCAAGATGG CATTGAATCA ATTGACGATC TTATTTTTGT TAAAAGCCTA
GTGGTTGAAG CTGTTGAGAA ACAAGGTGTC GTTGTCTTGA ACGCTAGCGA TCACTATGTA
TCTGATTTCA TTAGAAAGGC TAAAGGGAGA ATAATATTTT ACGCCATGGA ATCCGATAAT
CATTATGTTA AATCACATTT AGCGGCGGGA GGATCAGCAC TATATTTAGA TCAGGATAAT
ATTGTATACG CTACTGGGAA ATTTCACAGA AAATTAGGGG AGATAACTCA ATTGCCTCTA
ACCATGGCTG GTATGGCTCG TCATAATATA GAAAATTGCA TGGCAGGGAT AGCTGCTGCT
ATTGGTTTCG GCATAGCTCC TAGCAAAGCA TTTGAAGTTT TAAAGCAATT TGCTCCAAGC
TATCAAGATA CCCCGGGAAG ATGTAATTTG TTTCGTTGTC AAGGAAAAAC AGTCTTACTC
GATTATGGTC ACAACCCCGA AGGGATGAAT CGAGTGTTAG CAATGGTAGA AAAAATGCCA
GTAGAAAAAG TGATAAGTGT GATTGGAGTA CCTGGTGACA GGAATGACAA ACTGATTAAA
GAAACGGGAA AAGTGGTGGG AAAGTATCAT GAATTAATCG AGAAAGTTCT AGTCAAAGAA
GATTCGGATT TAAGGGGGAG AAAGTCTGGT GAAACAGCGA ATCTGTTACA AACAACTATG
ACCGAATTTT CAGAAGAACT GGCTGTAGAA CAAAACTTAC AAGAAATTGA AGCAATAAAA
ACAGCTCTTT CAGAAGCGGG TGAAAATGAT TTGGTTCTAA TATTTTACGA ACAAAAAGAC
AGTTTCTTTA ATGCATCTGA AGAGCTAGGC TTATCTCCGG AACCTTTAGA CTTTAATAAA
TTGGCATCCC AATCTAATAA TCCAGTTTCC CAAAAACTCA ATTAA
 
Protein sequence
MEIINIKTIS GKNIYSHEPV LEAELDLGDF AGVFSNNVSC FNSRLHQILP SLQEHVCSRG 
YPGGFLERLE EGTLFGHIIE HVTLELMNLA GIGTNYGTTK ATQEDGIYQV IVEQINEEGA
KYALEQSVEL VKNVINDNPV QVEEIVSEIQ EIVNETKIGP STEAILSAAE EQEIPYLKLD
EASMYQLGTG KYQKRIQATV TDETSVIGVD IACDKTKTNN SLHELGLPVP YGKIASTEEE
AVAIVQEIGY PIVIKPRDGN QGKGVTLNIN SEQETRSAFK VAMSYGDEAI VEQHIEGKHY
RLVVVGDQLV AGAERIPAHV VGDGQHTIRE LVDIENQNPL RGFGHEKPLS KIQLDPVVNM
VLARKNMTMN YIPQQDELVY LRESANLSTG GISLDVTDEI SDKTIRIAIR VAKIVGLDIA
GVDLVAKDIG KPVDEDDNGA IIEVNAAPGI RMHEHPVKGH PRRVGKSIVD HLFNKRNDTL
QARAPVISVT GTNGKTTTVR AIDHILRSNG KDVGMTSSDG TFIKGELIDS GDNTGPNSAK
ALLKDPTIDS FVFETARGGL VKNGLGYSNA KVAVVTNIAN DHLGQDGIES IDDLIFVKSL
VVEAVEKQGV VVLNASDHYV SDFIRKAKGR IIFYAMESDN HYVKSHLAAG GSALYLDQDN
IVYATGKFHR KLGEITQLPL TMAGMARHNI ENCMAGIAAA IGFGIAPSKA FEVLKQFAPS
YQDTPGRCNL FRCQGKTVLL DYGHNPEGMN RVLAMVEKMP VEKVISVIGV PGDRNDKLIK
ETGKVVGKYH ELIEKVLVKE DSDLRGRKSG ETANLLQTTM TEFSEELAVE QNLQEIEAIK
TALSEAGEND LVLIFYEQKD SFFNASEELG LSPEPLDFNK LASQSNNPVS QKLN