Gene Nther_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0039 
Symbol 
ID6314248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp53006 
End bp53914 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content37% 
IMG OID642642411 
ProductPSP1 domain protein 
Protein accessionYP_001916226 
Protein GI188584681 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAAT ATATCGTTGT TGGCGTAAGG TTTAAAAAAG CTGGGAAAAT ATATTATTTT 
GATCCCAATG ATATAGATTT GGAAGTAGGT AATAAAGTCA TTGTTGAAAC TGCAAGGGGT
TTGGAGTTCG GACAAGTGGT TACAGGTCCC AAAGAAGTAA CGGAAGAAGA TATTGTTGCT
CCACTTAAAC AGGTGTTGAG AAAGGCAACA GAGGAAGACG AAGAAAAAGT GGCCGAAATT
AAACAAAAAG AAGACCAGGC CTTTGAGGTC TGTTTGGATA AAATCTCCAA ACACGGCCTG
GAAATGAAAT TAGTAGATGT TGAACAGAGT TTTGATGGTA GCAAAATAAT CTTTTACTTC
ACTGCTGATG GTCGAGTAGA TTTCAGAGAG CTTGTTAAAG ACCTGGCAAG TGTTTTTAAA
ACACGGATAG AATTAAGGCA AATAGGTGTC CGGGATGAAG CTAAAATGCT AGGTGGTATT
GGCCCATGTG GAAGAATCAT GTGTTGTGCA TCTTTTTTAG GAGATTTTGA ACCTGTGTCA
ATTAAAATGG CCAAGGAGCA AAACTTAGCT TTAAACCCAA ATAAAATTTC AGGTATTTGT
GGTCGTTTAA TGTGTTGTCT TAGATATGAA TCCGATATTT ATGAAGAAGC CCAAGAGACC
TTTCCTCAAA CAGGCGAAAT TGTAGATACT GGTGAAGGAA AGGGAGAAGT TCAAGATTTT
AATGTAATTA AAGAAACTGT TCAGGTTAAA ATGGAAGATA CTCATATTAT TAAAGAATAT
AACCTTGACG AACTCACAAG GATCAATGGG GGGTGTGGTG GTCAACACAA GTGTCATTCT
AAAGATCACT GCCACAATAA TCAACTGGAA AAAGATATTG AAGATGAGCT TAGAAAGTTA
GAAGATTAA
 
Protein sequence
MEKYIVVGVR FKKAGKIYYF DPNDIDLEVG NKVIVETARG LEFGQVVTGP KEVTEEDIVA 
PLKQVLRKAT EEDEEKVAEI KQKEDQAFEV CLDKISKHGL EMKLVDVEQS FDGSKIIFYF
TADGRVDFRE LVKDLASVFK TRIELRQIGV RDEAKMLGGI GPCGRIMCCA SFLGDFEPVS
IKMAKEQNLA LNPNKISGIC GRLMCCLRYE SDIYEEAQET FPQTGEIVDT GEGKGEVQDF
NVIKETVQVK MEDTHIIKEY NLDELTRING GCGGQHKCHS KDHCHNNQLE KDIEDELRKL
ED