Gene Nther_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0031 
Symbol 
ID6316800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp45502 
End bp46953 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content36% 
IMG OID642642403 
ProductOrn/Lys/Arg decarboxylase major region 
Protein accessionYP_001916218 
Protein GI188584673 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.901763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCT TACAACAGGC CATAGATGAG TACATAAAAA ATCAATACTC TAGATACCAT 
ACACCAGGAC ATATAGGTGG TGAGGGCAGT CCTGCCATAT CATTATTGGG GGAACAAGTA
TTTAAAGCTG ATCTGACTGA ATTACCTGGA CTCGACGATC TACATGCTCC AGAAAATGTG
ATTAAAAATG CTCAATCCAG GGCAGCCCAA GTCTTTGGAG CCGATTTTAC TCATTTTTTA
GTTAATGGAT CTTCAGCTGG AATTATTGCT ATGATCCTTG CAATGGTTGA GCCAGGAAAA
AAACTGGCAG TTCCCCGAAA TGCTCATCGA TCCGTCTATC ATGGTTTGAT TTTATCTGGT
GCTATTCCCG AATATATACC TGTTGAGGTC CCCAAAGAAA GTCCTGTAGC CTTCAATATA
TCTCCAGATG AATTGAATAA CACTATCTCA ACAAATATTG ATAGTTCAAA AACACCTGAA
GCTGTTTTGA TTACTAATCC TAGTTACCAC GGAGTTGCCA TTGATATGAA CAAAGTTGCA
TTGGATAGTA ATATACCCTT GCTAGTTGAC GAAGCCCATG GAGCACATTT TATTTTTTCA
AAGGATTTGC CTCCTGATGC TTCAGAATAT GGTGGCGATT TGTGGGTTCA AAGTACACAT
AAAACTCTAG GTTCTCTTAC TCAAAGTTCC ATGCTTCATG GAATTGAAAA TTTGGTTTCT
CGGGAAAAAT TAGCTTTTAT GCTACAACTT GTGCAAACCA CTAGTCCATC ATATCCTTTA
ATGGCATCAT TAGAATCTGT AATCGAATAT GCTGACAAAT ATCATAAACA TTGGCAGGAA
TTTATTAGCA ACAGGTTAAA ATATATTAGA AATAAAATTT GCGAAATTCC AGGATTACAA
CTGGTGACAC CAGAACAAAT TACGACAGGA TTTAAATTGG ACCCGTCTAA GTTAACTATT
GATTTACGGG AACTAAATAT TTCCGGGTAT AAATTATCAG ATTTACTCCG AAATGAATTT
GGAATTCAGG TTGAATTGGT AGATAGTAAT AGTATTATGC TTATGTTAAC TCCATATCAC
ACGGAGAGGG AGTTAGATTA TCTTATAAAT AGCCTGGAAA CAATAGTAAA CAATAAAAAT
AGTTATCAAA TTGTCAATAA TACTGTAGAT AAACAATTAG TAGCAAAAAC AGATATTCCC
TATCCACAAG TTGAGATTAC TCCTAGAGAA GCAGTTTACC AAGAAGGAGA GTATATTGAA
CTATCTGAAG CTATTGGAAG AGTAGCCCAA GAATTTGTTA TTCCTTATCC TCCGGGAATA
CCTGCATTAG TACCAGGAGA AATTATAACA GGGGATGTAT ATGAATATTT AAATAAATTA
ACGGAAAATC CTGAAATACA TATACAGGGA TTTTACTACA GCAGTTCTAG CTACATTAAA
GTGATAAGAT GA
 
Protein sequence
MDSLQQAIDE YIKNQYSRYH TPGHIGGEGS PAISLLGEQV FKADLTELPG LDDLHAPENV 
IKNAQSRAAQ VFGADFTHFL VNGSSAGIIA MILAMVEPGK KLAVPRNAHR SVYHGLILSG
AIPEYIPVEV PKESPVAFNI SPDELNNTIS TNIDSSKTPE AVLITNPSYH GVAIDMNKVA
LDSNIPLLVD EAHGAHFIFS KDLPPDASEY GGDLWVQSTH KTLGSLTQSS MLHGIENLVS
REKLAFMLQL VQTTSPSYPL MASLESVIEY ADKYHKHWQE FISNRLKYIR NKICEIPGLQ
LVTPEQITTG FKLDPSKLTI DLRELNISGY KLSDLLRNEF GIQVELVDSN SIMLMLTPYH
TERELDYLIN SLETIVNNKN SYQIVNNTVD KQLVAKTDIP YPQVEITPRE AVYQEGEYIE
LSEAIGRVAQ EFVIPYPPGI PALVPGEIIT GDVYEYLNKL TENPEIHIQG FYYSSSSYIK
VIR