| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0012 |
|---|
| Symbol | |
|---|
| ID | 6314409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 21504 |
|---|
| End bp | 22391 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642642379 |
|---|
| Product | pyridoxal biosynthesis lyase PdxS |
|---|
| Protein accession | YP_001916199 |
|---|
| Protein GI | 188584654 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0121717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAG AAAAAGGTAC AGAAACAGTA AAAAAAGGTA TGGCCCAAAT GCAAAAAGGC
GGAGTTATCA TGGATGTTAC AACTCCCGAA CAGGCTAAAA TAGCTGAAAA AGCAGGAGCT
GTAGCAGTGA TGGCTTTAGA AAAAGTGCCT GCAGATATAA GAGCTGGTGG TGGAGTAGCA
CGAATGGCAG ATCCTGAGGT TATTAAAAAG ATCATGGATG CTGTAAGTAT CCCAGTTATG
GCCAAGGCAC GAATTGGTCA TTTTGTGGAA GCTCGTATTT TGGAAAATTT AGGCGTTGAT
TATATAGACG AAAGTGAAGT GCTTACCCCA GCCGATGAAT ATTATCACAT TGATAAAAAC
AAATTCACTG TCCCTTTTGT ATGTGGTGCT AGGAATTTAG GAGAAGCCTT ACGCCGTGTT
GGAGAAGGCG CTTCTATGAT GAGAACTAAA GGGGAAGCAG GAACGGGTAA TGTGGTAGAG
GCTGTACGTC ATATAAGAAC TGTTATGGAT GGTATCAGAA AAGTTCAAAA TCTTCCTGAT
GATGAGTTAA TGACTGAAGC TAAGAATATT GGAGCACCTT ATGACCTTAT TAAACAAGTT
AAAGAAGAGG GAAGATTGCC TGTAGTTAAC TTCGCTGCTG GTGGAGTAGC TACACCTGCC
GATGCAGCTT TGATGATGCA ATTAGGTGCC GATGGAGTTT TTGTAGGTTC AGGTATATTT
AAATCAGGTG ATCCTGAAAA AAGAGCAAAA TCTATTGTAG AAGCAACATT AAATTACGAT
AATTATGATG TGTTGGCTGA TGTTTCTTCA GGATTGGGTG AAGCGATGGT AGGAATTAAT
GTATCCGATC TGGAAGAACA GGAAAGGATG CAAAATCGAG GCTGGTAA
|
|---|
| Protein sequence | MNIEKGTETV KKGMAQMQKG GVIMDVTTPE QAKIAEKAGA VAVMALEKVP ADIRAGGGVA
RMADPEVIKK IMDAVSIPVM AKARIGHFVE ARILENLGVD YIDESEVLTP ADEYYHIDKN
KFTVPFVCGA RNLGEALRRV GEGASMMRTK GEAGTGNVVE AVRHIRTVMD GIRKVQNLPD
DELMTEAKNI GAPYDLIKQV KEEGRLPVVN FAAGGVATPA DAALMMQLGA DGVFVGSGIF
KSGDPEKRAK SIVEATLNYD NYDVLADVSS GLGEAMVGIN VSDLEEQERM QNRGW
|
|---|
| |