| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0011 |
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| Symbol | |
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| ID | 6314408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 20325 |
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| End bp | 21422 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642642378 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001916198 |
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| Protein GI | 188584653 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.133339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAAAAGT TAAGGGTTGG AGTACTTTTT GGAGGACGTT CTGGAGAACA TGAAGTTAGC
CTAAAGTCTG CGAATTCGAT TTTGAACGCT TTAGATAGAG AATTATTTGA AGTGATTCCC
ATAGGAATTC GTAAAAATGG AGAATGGATT TCAGGGGAAG CACCCTTGGA AGAGTTGGAA
ACCGGTATAA AAAATCAGGG AAATTATGCT GTAAGTATTC TACCTGATCC ATCCAAAAAA
GTTCTTTGGA AATTAGATCC CTTTGAAAAA ATTAGTGAGA TTGACCTGAT TTTCCCAGTG
CTTCACGGAA CTTTTGGAGA AGATGGTACT GTTCAAGGTT TTTTAGATCT TTGTGGAATT
CCTTATGTGG GTTCAGGAGT TTTAGGATCT TCTTTGGCCA TGGATAAAGT CATGATGAAA
AAAATATTAA GACGTCATGG ATTACAAGTT GCTAATTACT ATTCATTCAA AAGAAGTGAA
TGGGAACAAG ATCGGGATGA AATTATTTTT AGCATAGAAA AACAACTTTC ATATCCTATT
TTTGTTAAAC CTGCTAATTT AGGGTCTAGT GTTGGAATTT CCAAAGTTAA AAATAGAGAA
GAACTAATTC AAGGTATTGA TTTAGCTGTT AAATACGATA TGAAATGTTT AGCCGAAGAA
TTTATACCAG GAAAAGAAAT AGAATTAAGT ATCCTTGGTA ATGATAATCC TAAGACTTCA
GTTCCAGGAG AGATAATCCC AGCAAATGAG TTTTATGACT ACAATGCAAA ATATATTAAT
AATAAAAGCA AACTAGTTAT CCCAGCACCT CTCTCAGAAA CACTTAAGAC TAAAATTGAA
GACATGGGAG TTGAAGCTTT TAGAGTATTA GACTGTTATG GATTATCTAG AGTAGATTAT
TTTGTCCTAG AAGATCAAGA AGAGGTTTAT ATCAATGAAA TCAATACTAT GCCTGGCTTT
ACTGAAATTA GCATGTACCC TAAACTATGG ACTGAATCGG GACTATCCTA CTCTCAACTA
TTAACTGATT TGATTTATCT AGCACTAGCA AGGCAGCAAG AAAAGGATAG GAATTCAACT
GATTTTTCGG AATCATAA
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| Protein sequence | MKKLRVGVLF GGRSGEHEVS LKSANSILNA LDRELFEVIP IGIRKNGEWI SGEAPLEELE
TGIKNQGNYA VSILPDPSKK VLWKLDPFEK ISEIDLIFPV LHGTFGEDGT VQGFLDLCGI
PYVGSGVLGS SLAMDKVMMK KILRRHGLQV ANYYSFKRSE WEQDRDEIIF SIEKQLSYPI
FVKPANLGSS VGISKVKNRE ELIQGIDLAV KYDMKCLAEE FIPGKEIELS ILGNDNPKTS
VPGEIIPANE FYDYNAKYIN NKSKLVIPAP LSETLKTKIE DMGVEAFRVL DCYGLSRVDY
FVLEDQEEVY INEINTMPGF TEISMYPKLW TESGLSYSQL LTDLIYLALA RQQEKDRNST
DFSES
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