| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_06224 |
|---|
| Symbol | |
|---|
| ID | 6306323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2891801 |
|---|
| End bp | 2893276 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642640084 |
|---|
| Product | ISXoo5 transposase |
|---|
| Protein accession | YP_001913943 |
|---|
| Protein GI | 188577014 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACA CCCAGAACGC CGACTTCTTC CGGCAGCCCT TGGCCGAGAT GATCGATCCG
CGCCACCCGC TGGCGGTGCT GGCCCGTCGG CTGCCCCGGG CGCAGATCGA GGCGGTGTTG
GCCCCGCATT TCGCTCGCAA GGTGCGCGCA GGTCGCGCGG TGGCGCAACA CGATCTGTTC
GGCCCCTCGG TGCAAGTGGC CGGTGCCGGT ATTGCCGCTT CCGGCCGCCC ACGCCTTCCC
ATTCGCTTGA TGGCCAGCCT GTTGGACCTG AAGCACGCTT ACAAGCTCAG CGACGAGGAA
CTGGTGGAGC GCTGGGCCCA GAACGTGGTC TGGCAGCACT TCAGCGGCAT GGCGTTCTAT
GAGCCGCGCC TGCCCTGCGA TGCCACGCAG GTCGGGCGTT TTCGCGCGGC CATCGGTGAG
GCCGGGGTCG AGGAACTGCT CAAGGCCACC ATCGACACCG CGGTGTCCTC CAAGGCCATC
GTGCCCGCCG AGTTCGAACG GCTGATCGTG GACACCACCG TGCAGGAGAA GGCCATTGCT
CATCCGGTGG ATTGGCGCCT GATGGAGAAC GCGCGGCACA AGCTGGTGGC GGCGGCCAAG
CGCGCGGGCA TCGCGCTCAA GCAGACCTTC GCCAAAGAAA CCAAGACGCT GCGGCGCAAA
GCCGGCGGCT ACGCCCATGC CAGGCAGTTC AAGCGCCTGC GCAAGGTCCT CAAACGCCAG
CGCACGATCC TGGGCATCGT ACTGCGCGAG GTGCAGCGCA AGATCAGGCA AGCCAGCCAG
GCCACGGCGC CGGCGCTGGA GAATCTGCAC ACGCTGATGC AGCGCGCCGA GCGCATCCAT
GCTCAGCAAC CCAATGGCAA GAACAAACTC TATGCCCTGC ACGCGCCCGA AGTGGAGTGC
ATCGGCAAGG GCAAGGCGCG CAAGCCCTAC GAGTTCGGGG TGAAGGTCAG CGTGGCAATC
ACGCACAAAC AGGGCCTGAT GGTCGGAGCG CGCAGCTTCA CCTGCCCCCC CTATGACGGC
CACACGTTGC ACGAGCAACT GGAGCAGGCC CGGATCCTGA GCGAGGACAC AGCAGGCGCA
CCTAAACAGG TGGTGGTGGA CCTGGGCTTT CGCGGTGTGG ATGCGGCCAA TCCCGGCGTT
AAGATCATCC ACCGGGGCAA GTTCAAACGC CTGACAGATG AGCAGCGCCG CTGGCTGAAG
CGACGCCAGG CGGTGGAGCC GGCCATCGGA CACTTGAAGC ACGACAACGG CATGGATCGG
TGCTGGTTGC AAGGAGCGAA CGGCGATGCG CTGCACGCAG TGCTGTGCGC GGCGGGGGAC
AACATCCGCC GGTTGCTGCG GGCCATGGTG CGTCTGGGAC TGAAGGGTCT TTTTGCGCCT
ATGTTTGCGA GACTCATCAT GCTGGCCACA GTGCTCGCAA TGTCATTGCG AGCGAGGAAC
ACACGCCCAC ATCGGTTGGC TTGGTGTGTT TGGTGA
|
|---|
| Protein sequence | MAHTQNADFF RQPLAEMIDP RHPLAVLARR LPRAQIEAVL APHFARKVRA GRAVAQHDLF
GPSVQVAGAG IAASGRPRLP IRLMASLLDL KHAYKLSDEE LVERWAQNVV WQHFSGMAFY
EPRLPCDATQ VGRFRAAIGE AGVEELLKAT IDTAVSSKAI VPAEFERLIV DTTVQEKAIA
HPVDWRLMEN ARHKLVAAAK RAGIALKQTF AKETKTLRRK AGGYAHARQF KRLRKVLKRQ
RTILGIVLRE VQRKIRQASQ ATAPALENLH TLMQRAERIH AQQPNGKNKL YALHAPEVEC
IGKGKARKPY EFGVKVSVAI THKQGLMVGA RSFTCPPYDG HTLHEQLEQA RILSEDTAGA
PKQVVVDLGF RGVDAANPGV KIIHRGKFKR LTDEQRRWLK RRQAVEPAIG HLKHDNGMDR
CWLQGANGDA LHAVLCAAGD NIRRLLRAMV RLGLKGLFAP MFARLIMLAT VLAMSLRARN
TRPHRLAWCV W
|
|---|
| |